Geology topics

Jordan M. Thompson

Publications and source records attributed to Jordan M. Thompson.

3 recordsLinked to original sources

USGS2025

Observational, virological, and serological data provide insights into an outbreak of highly pathogenic avian influenza among wild birds on the Yukon-Kuskokwim Delta, Alaska in 2022

In 2021–22, clade 2.3.4.4b highly pathogenic avian influenza (HPAI) viruses were introduced by wild birds into North America, leading to geographically widespread disease. In response to HPAI outbreaks throughout late 2021 and early 2022, we recorded observations of sick and dead birds, estimated abundance of carcasses, collected swab and sera samples to detect viruses, and monitored bird nesting on the Yukon-Kuskokwim Delta region of Alaska to document potential effects of disease. Thirty-six reports of sick and dead birds were registered across the region. Nineteen carcasses were opportunistically collected for diagnostic testing, of which 12 were confirmed to be infected with clade 2.3.4.4b HPAI viruses. Carcass abundance estimates from line-distance sampling provided evidence that the most common species of dead birds from the western Yukon-Kuskokwim Delta region were Cackling Goose ( Branta hutchinsii minima ), Glaucous Gull ( Larus hyperboreus ), and Black Brant ( Branta bernicla nigricans ). Only one paired cloacal and oropharyngeal swab sample from a Northern Pintail ( Anas acuta ) tested positive for clade 2.3.4.4b HPAI virus, out of 464 live-captured duck and goose samples. Of 195 sera samples from waterfowl screened for antibodies reactive to influenza A viruses, antibodies were found in 41–98% of samples collected from Emperor Goose ( Anser canagicus ), Cackling Goose, Black Brant, and Spectacled Eider ( Somateria fischeri ). In addition, 15–98% of the same sera samples were reactive to a clade 2.3.4.4b H5 antigen. Fewer Black Brant and Emperor Goose nests were found on long-term study plots during 2022 than in previous years. Collectively, we found that HPAI viruses affected at least seven species of wild birds inhabiting the region during 2022. The full scope of impacts of HPAI at this location during 2022 is unknown, but our data indicate that acute effects to avian population health on the Yukon-Kuskokwim Delta region were likely modest.

Alaska↗

USGS2024

Previous reproductive success and environmental variation influence nest-site fidelity of a subarctic-nesting goose

Nest-site fidelity is a common strategy in birds and is believed to be adaptive due to familiarity with local conditions. Returning to previously successful nest sites (i.e., the win-stay lose-switch strategy) may be beneficial when habitat quality is spatially variable and temporally predictable; however, changes in environmental conditions may constrain dispersal decisions despite previous reproductive success. We used long-term (2000–2017) capture-mark-reencounter data and hierarchical models to examine fine-scale nest-site fidelity of emperor geese ( Anser canagicus ) on the Yukon-Kuskokwim Delta in Alaska. Our objectives were to quantify nest-site dispersal distances, determine whether dispersal distance is affected by previous nest fate, spring timing, or major flooding events on the study area, and determine if nest-site fidelity is adaptive in that it leads to higher nest survival. Consistent with the win-stay lose-switch strategy, expected dispersal distance for individuals that failed their nesting attempt in the previous year (207.9 m,14 95% HPDI:150.9–271.4) was greater than expected dispersal distance for individuals who nested successfully in the previous year (125.8 m, 95% HPDI:107.1–145.9). Expected dispersal distance was slightly greater following years of major flooding events for individuals that nested successfully, although this pattern was not observed for individuals who failed their nesting attempt. We did not find evidence that expected dispersal distance was influenced by spring timing. Importantly, dispersal distance was positively related to daily survival probability of emperor goose nests for individuals who failed their previous nesting attempt, suggesting an adaptive benefit to the win-stay lose-switch strategy. Our results highlight the importance of previous experience and environmental variation for informing dispersal decisions of a long-lived goose species. However, it is unclear if dispersal decisions based on previous experience will continue to be adaptive as variability in environmental conditions increases in northern breeding areas.

Alaska↗

USGS2023

Nest traits and major flooding events influence nest survival of Emperor Geese while regional environmental variation linked to climate does not

The reproductive ecology of geese that breed in the Arctic and subarctic is likely susceptible to the effects of climate change, which is projected to alter the environmental conditions of northern latitudes. Nest survival is an important component of productivity in geese; however, the effects of regional environmental conditions on nest survival are not well understood for some species, including the Emperor Goose ( Anser canagicus ), a species of conservation concern that is endemic to the Bering Sea region. We estimated nest survival and examined how indices of regional environmental conditions, nest traits (nest age, initiation date, and maximum number of eggs in the nest), and researcher disturbance influenced daily survival probability (DSP) of Emperor Goose nests using hierarchical models and 24 years of nest monitoring data (1994–2017) from the Yukon–Kuskokwim Delta (Y–K Delta) in western Alaska. Our results indicate that overall nest survival was generally high (µ = 0.766, 95% CRI: 0.655–0.849) and ranged from 0.327 (95% CRI: 0.176–0.482) in 2013 to 0.905 (95% CRI: 0.839–0.953) in 1995. We found that DSPs of nests were influenced by nest traits, negatively influenced by major tidal flooding events and by researcher disturbance, but were not influenced by regional indices of spring timing, temperature and precipitation during nesting, or fox and vole abundance on the Y–K Delta. However, the number of nests found each year was negatively related to our index of fox abundance, suggesting nests that failed as a result of fox predation may have never been discovered due to our limited nest-searching efforts during egg laying. Our results suggest that regional environmental variation had minimal influence on the nest survival of Emperor Geese, although major flooding events were important. Nevertheless, we suspect that within-year variation in local weather conditions and local abundance of predators and alternative prey may be important and should be considered in future studies.

Alaska↗