Geology topics

John D. Lyons

Publications and source records attributed to John D. Lyons.

6 recordsLinked to original sources

USGS2016

FishVis, A regional decision support tool for identifying vulnerabilities of riverine habitat and fishes to climate change in the Great Lakes Region

Climate change is expected to alter the distributions and community composition of stream fishes in the Great Lakes region in the 21st century, in part as a result of altered hydrological systems (stream temperature, streamflow, and habitat). Resource managers need information and tools to understand where fish species and stream habitats are expected to change under future conditions. Fish sample collections and environmental variables from multiple sources across the United States Great Lakes Basin were integrated and used to develop empirical models to predict fish species occurrence under present-day climate conditions. Random Forests models were used to predict the probability of occurrence of 13 lotic fish species within each stream reach in the study area. Downscaled climate data from general circulation models were integrated with the fish species occurrence models to project fish species occurrence under future climate conditions. The 13 fish species represented three ecological guilds associated with water temperature (cold, cool, and warm), and the species were distributed in streams across the Great Lakes region. Vulnerability (loss of species) and opportunity (gain of species) scores were calculated for all stream reaches by evaluating changes in fish species occurrence from present-day to future climate conditions. The 13 fish species included 4 cold-water species, 5 cool-water species, and 4 warm-water species. Presently, the 4 cold-water species occupy from 15 percent (55,000 kilometers [km]) to 35 percent (130,000 km) of the total stream length (369,215 km) across the study area; the 5 cool-water species, from 9 percent (33,000 km) to 58 percent (215,000 km); and the 4 warm-water species, from 9 percent (33,000 km) to 38 percent (141,000 km). Fish models linked to projections from 13 downscaled climate models projected that in the mid to late 21st century (2046–65 and 2081–2100, respectively) habitats suitable for all 4 cold-water species and 4 of 5 cool-water species under present-day conditions will decline as much as 86 percent and as little as 33 percent, and habitats suitable for all 4 warm-water species will increase as much as 33 percent and as little as 7 percent. This report documents the approach and data used to predict and project fish species occurrence under present-day and future climate conditions for 13 lotic fish species in the United States Great Lakes Basin. A Web-based decision support mapping application termed “FishVis” was developed to provide a means to integrate, visualize, query, and download the results of these projected climate-driven responses and help inform conservation planning efforts within the region.

Great Lakes Region↗

USGS2015

A model for evaluating stream temperature response to climate change in Wisconsin

Expected climatic changes in air temperature and precipitation patterns across the State of Wisconsin may alter future stream temperature and flow regimes. As a consequence of flow and temperature changes, the composition and distribution of fish species assemblages are expected to change. In an effort to gain a better understanding of how climatic changes may affect stream temperature, an approach was developed to predict and project daily summertime stream temperature under current and future climate conditions for 94,341 stream kilometers across Wisconsin. The approach uses a combination of static landscape characteristics and dynamic time-series climatic variables as input for an Artificial Neural Network (ANN) Model integrated with a Soil-Water-Balance (SWB) Model. Future climate scenarios are based on output from downscaled General Circulation Models (GCMs). The SWB model provided a means to estimate the temporal variability in groundwater recharge and provided a mechanism to evaluate the effect of changing air temperature and precipitation on groundwater recharge and soil moisture. The Integrated Soil-Water-Balance and Artificial Neural Network version 1 (SWB-ANNv1) Model was used to simulate daily summertime stream temperature under current (1990–2008) climate and explained 76 percent of the variation in the daily mean based on validation at 67 independent sites. Results were summarized as July mean water temperature, and individual stream segments were classified by thermal class (cold, cold transition, warm transition, and warm) for comparison of current (1990–2008) with future climate conditions. Integrating the SWB Model with the ANN Model provided a mechanism by which downscaled global or regional climate model results could be used to estimate the potential effects of climate change on future stream temperature on a daily time step. To address future climate scenarios, statistically downscaled air temperature and precipitation projections from 10 GCMs and 2 time periods were used with the SWB-ANNv1 Model to project future stream temperature. Projections of future stream temperatures at mid- (2046–65) and late- (2081–2100) 21st century showed the July mean water temperature increasing for all stream segments with about 80 percent of stream kilometers increasing by 1 to 2 degrees Celsius (°C) by mid-century and about 99 percent increasing by 1 to 3 °C by late-century. Projected changes in stream temperatures also affected changes in thermal classes with a loss in the total amount of cold-water, cold-transition, and warm-transition thermal habitat and a gain in warm-water and very warm thermal habitat for both mid- and late-21st century time periods. The greatest losses occurred for cold-water streams and the greatest gains for warm-water streams, with a contraction of cold-water streams in the Driftless Area of western and southern Wisconsin and an expansion of warm-water streams across northern Wisconsin. Results of this study suggest that such changes will affect the composition of fish assemblages, with a loss of suitable habitat for cold-water fishes and gain in suitable habitat for warm-water fishes. In the end, these projected changes in thermal habitat attributable to climate may result in a net loss of fisheries, because many warm-water species may be unable to colonize habitats formerly occupied by cold-water species because of other habitat limitations (e.g., stream size, gradient). Although projected stream temperatures may vary greatly, depending on the emissions scenario and models used, the results presented in this report represent one possibility. The relative change in stream temperature can provide useful information for planning for potential climate impacts to aquatic ecosystems. Model results can be used to help identify vulnerabilities of streams to climate change, guide stream surveys and thermal classifications, prioritize the allocation of scarce financial resources, identify approaches to climate adaptation to best protect and enhance resiliency in stream thermal habitat, and provide information to make quantitative assessments of statewide stream resources.

Wisconsin↗

USGS2014

Predicted effects of future climate warming on thermal habitat suitability for Lake Sturgeon ( Acipenser fulvescens , Rafinesque, 1817) in rivers in Wisconsin, USA

The Lake Sturgeon ( Acipenser fulvescens , Rafinesque, 1817) may be threatened by future climate warming. The purpose of this study was to identify river reaches in Wisconsin, USA, where they might be vulnerable to warming water temperatures. In Wisconsin, A. fulvescens is known from 2291 km of large-river habitat that has been fragmented into 48 discrete river-lake networks isolated by impassable dams. Although the exact temperature tolerances are uncertain, water temperatures above 28–30°C are potentially less suitable for this coolwater species. Predictions from 13 downscaled global climate models were input to a lotic water temperature model to estimate amounts of potential thermally less-suitable habitat at present and for 2046–2065. Currently, 341 km (14.9%) of the known habitat are estimated to regularly exceed 28°C for an entire day, but only 6 km (0.3%) to exceed 30°C. In 2046–2065, 685–2164 km (29.9–94.5%) are projected to exceed 28°C and 33–1056 km (1.4–46.1%) to exceed 30°C. Most river-lake networks have cooler segments, large tributaries, or lakes that might provide temporary escape from potentially less suitable temperatures, but 12 short networks in the Lower Fox and Middle Wisconsin rivers totaling 93.6 km are projected to have no potential thermal refugia. One possible adaptation to climate change could be to provide fish passage or translocation so that riverine Lake Sturgeon might have access to more thermally suitable habitats.

Wisconsin↗

USGS2012

A model for evaluating stream temperature response to climate change scenarios in Wisconsin

Global climate change is expected to alter temperature and flow regimes for streams in Wisconsin over the coming decades. Stream temperature will be influenced not only by the predicted increases in average air temperature, but also by changes in baseflow due to changes in precipitation patterns and amounts. In order to evaluate future stream temperature and flow regimes in Wisconsin, we have integrated two existing models in order to generate a water temperature time series at a regional scale for thousands of stream reaches where site-specific temperature observations do not exist. The approach uses the US Geological Survey (USGS) Soil-Water-Balance (SWB) model, along with a recalibrated version of an existing artificial neural network (ANN) stream temperature model. The ANN model simulates stream temperatures on the basis of landscape variables such as land use and soil type, and also includes climate variables such as air temperature and precipitation amounts. The existing ANN model includes a landscape variable called DARCY designed to reflect the potential for groundwater recharge in the contributing area for a stream segment. SWB tracks soil-moisture and potential recharge at a daily time step, providing a way to link changing climate patterns and precipitation amounts over time to baseflow volumes, and presumably to stream temperatures. The recalibrated ANN incorporates SWB-derived estimates of potential recharge to supplement the static estimates of groundwater flow potential derived from a topographically based model (DARCY). SWB and the recalibrated ANN will be supplied with climate drivers from a suite of general circulation models and emissions scenarios, enabling resource managers to evaluate possible changes in stream temperature regimes for Wisconsin.

Wisconsin↗

USGS2011

Effects of dams in river networks on fish assemblages in non-impoundment sections of rivers in Michigan and Wisconsin, USA

Regional assessment of cumulative impacts of dams on riverine fish assemblages provides resource managers essential information for dam operation, potential dam removal, river health assessment and overall ecosystem management. Such an assessment is challenging because characteristics of fish assemblages are not only affected by dams, but also influenced by natural variation and human-induced modification (in addition to dams) in thermal and flow regimes, physicochemical habitats and biological assemblages. This study evaluated the impacts of dams on river fish assemblages in the non-impoundment sections of rivers in the states of Michigan and Wisconsin using multiple fish assemblage indicators and multiple approaches to distinguish the influences of dams from those of other natural and human-induced factors. We found that environmental factors that influence fish assemblages in addition to dams should be incorporated when evaluating regional effects of dams on fish assemblages. Without considering such co-influential factors, the evaluation is inadequate and potentially misleading. The role of dams alone in determining fish assemblages at a regional spatial scale is relatively small (explained less than 20% of variance) compared with the other environmental factors, such as river size, flow and thermal regimes and land uses jointly. However, our results do demonstrate that downstream and upstream dams can substantially modify fish assemblages in the non-impoundment sections of rivers. After excluding river size and land-use influences, our results clearly demonstrate that dams have significant impacts on fish biotic-integrity and habitat-and-social-preference indicators. The influences of the upstream dams, downstream dams, distance to dams, and dam density differ among the fish indicators, which have different implications for maintaining river biotic integrity, protecting biodiversity and managing fisheries.

Wisconsin and Michigan↗

USGS2010

Predicted effects of climate warming on the distribution of 50 stream fishes in Wisconsin, U.S.A.

Summer air and stream water temperatures are expected to rise in the state of Wisconsin, U.S.A., over the next 50 years. To assess potential climate warming effects on stream fishes, predictive models were developed for 50 common fish species using classification-tree analysis of 69 environmental variables in a geographic information system. Model accuracy was 56·0–93·5% in validation tests. Models were applied to all 86 898 km of stream in the state under four different climate scenarios: current conditions, limited climate warming (summer air temperatures increase 1° C and water 0·8° C), moderate warming (air 3° C and water 2·4° C) and major warming (air 5° C and water 4° C). With climate warming, 23 fishes were predicted to decline in distribution (three to extirpation under the major warming scenario), 23 to increase and four to have no change. Overall, declining species lost substantially more stream length than increasing species gained. All three cold-water and 16 cool-water fishes and four of 31 warm-water fishes were predicted to decline, four warm-water fishes to remain the same and 23 warm-water fishes to increase in distribution. Species changes were predicted to be most dramatic in small streams in northern Wisconsin that currently have cold to cool summer water temperatures and are dominated by cold-water and cool-water fishes, and least in larger and warmer streams and rivers in southern Wisconsin that are currently dominated by warm-water fishes. Results of this study suggest that even small increases in summer air and water temperatures owing to climate warming will have major effects on the distribution of stream fishes in Wisconsin.

Wisconsin↗