Geology topics

Jeremy S. Mack

Publications and source records attributed to Jeremy S. Mack.

10 recordsLinked to original sources

USGS2026

Dog attacks on wild desert tortoises: A risk model

We retrospectively compiled a database of 6,727 live, wild Agassiz's desert tortoises ( Gopherus agassizii ) and evaluated them for clinical signs of trauma to shell and limbs at 50 sites in the Mojave and Colorado (western Sonoran) deserts of California, USA, spanning the years 1977–2006. Our objectives were to 1) identify tortoises with severe trauma to shell, limbs, and gular horns typically seen in attacks from dogs ( Canis familiaris ); 2) identify locations where severe injuries occurred; and 3) develop a risk model based on distances of tortoises from settlements, towns, or cities. Our models identified multiple variables of importance for tortoises with severe damage to shells, limbs, and gular horns: relative age and sex of tortoises, decades of occurrence, and location. Females and very old tortoises were more vulnerable to attacks than other tortoises. In the decades between the 1970s and 2000s, the risk of severe overall trauma to shell and limbs increased 4 times and to gular horns 16.5 times. Compared to previous decades, by the early 2000s the percent of tortoises with severe trauma increased exponentially the closer a tortoise site was to a settlement; the exponential increase began at approximately 12 km from a settlement. We suggest that the risks may be higher now because of the growth of human populations within the geographic range of the tortoise. The threats to tortoises from dogs are based on whether dogs are off-leash in the Mojave and Colorado deserts.

Arizona, California, Nevada, Utah↗

USGS2018

Crowding affects health, growth, and behavior in headstart pens for Agassiz's desert tortoise

Worldwide, scientists have headstarted threatened and endangered reptiles to augment depleted populations. Not all efforts have been successful. For the threatened Agassiz's desert tortoise ( Gopherus agassizii ), one challenge to recovery is poor recruitment of juveniles into adult populations, and this is being addressed through headstart programs. We evaluated 8 cohorts of juvenile desert tortoises from 1 to 8 yrs old in a headstart program at Edwards Air Force Base, California, for health, behavior, and growth. We also examined capacities of the headstart pens. Of 148 juveniles evaluated for health, 99.3% were below a prime condition index; 14.9% were lethargic and unresponsive; 59.5% had protruding spinal columns and associated concave scutes; 29.1% had evidence of ant bites; and 14.2% had moderate to severe injuries to limbs or shell. Lifetime growth rates for juveniles 1–8 yrs of age were approximately two times less than growth rates reported for wild populations. Tortoises in older cohorts had higher growth rates, and models indicated that high density in pens and burrow sharing negatively affected growth rates. Densities of tortoises in pens (205–2042/ha) were 350–3500 times higher than the average density recorded in the wild (< 1/ha) for tortoises of similar sizes. The predominant forage species available to juveniles were alien annual grasses, which are nutritionally inadequate for growth. We conclude that the headstart pens were of inadequate size, likely contained too few shelters, and lacked the necessary biomass of preferred forbs to sustain the existing population. Additional factors to consider for future reptilian headstart pens include vegetative cover, food sources, soil seed banks, and soil composition.

California↗

USGS2016

Desert tortoise annotated bibliography, 1991-2015

Introduction Agassiz’s desert tortoise, Gopherus agassizii , was considered a single species for 150 years after its discovery by James Cooper (1861), with a geographic range extending from southeastern California, southern Nevada, and southwestern Utah southward into northern Sinaloa, Mexico (Murphy and others, 2011). What was once G. agassizii is now recognized as a complex composed of three sister species, G. agassizii , G. morafkai , and G. evgoodei (Murphy and others, 2011; Edwards and others, 2016) (fig. 1). The geographic range of Agassiz’s Desert Tortoise ( G. agassizii ) is now limited to north and west of the Colorado River (Murphy and others, 2011), with the exception of a small population in northwestern Arizona (Edwards and others, 2015). This annotated bibliography is based on peer-reviewed journal articles published between January 1991 and December 2015 on Agassiz’s Desert Tortoise, with the geographic range as defined by Murphy and others (2011). Studies pertaining to other species of Gopherus (e.g., G. morafkai ), were included only when associated with G. agassizii . In addition to articles pertaining directly to desert tortoises, we compiled articles concerning threats to desert tortoises and the habitats they occupy. Similarly, we only included studies that encompass other habitat types when they were directly compared with habitats of G. agassizii . Agassiz’s Desert Tortoise (hereinafter called desert tortoise) is a state- and federally-listed threatened species (U.S. Fish and Wildlife Service, 1990; California Department of Fish and Game, 2015). The first population federally listed as threatened occurred on the Beaver Dam Slope, Utah (U.S. Fish and Wildlife Service, 1980). In 1990, the entire geographic range north and west of the Colorado River was federally listed as threatened (U.S. Fish and Wildlife Service, 1990), with the exception being a small population in northwestern Arizona. The purpose of this annotated bibliography is to support recovery efforts for the species, because populations have continued to decline in spite of designation of critical habitat and publication of a recovery plan (U.S. Fish and Wildlife Service, 1994). For example, between 2005 and 2014, populations in critical habitats declined about 50% (U.S. Fish and Wildlife Service, 2015).

Open-File Report↗

USGS2015

Bidirectional recovery patterns of Mojave Desert vegetation in an aqueduct pipeline corridor after 36 years: I. Perennial shrubs and grasses

We studied recovery of 21 perennial plant species along a severely disturbed aqueduct corridor in a Larrea tridentata - Ambrosia dumosa plant alliance in the Mojave Desert 36 years after construction. The 97-m wide corridor contained a central dirt road and buried aqueduct pipeline. We established transects at 0 m (road verge), 20 m and 40 m into the disturbance corridor, and at 100 m in undisturbed habitat (the control). Although total numbers of shrubs per transect did not vary significantly with distance from the verge, canopy cover of shrubs, species richness, and species diversity were higher in the control than at the verge and other distances. Canopy cover of common shrubs ( Ericameria nauseosa, Ambrosia salsola, A. dumosa, L. tridentata, Grayia spinosa ) and perennial grasses ( Elymus elymoides, Poa secunda ) also varied significantly by location. Discriminant analysis clearly separated the four distances based on plant composition. Patterns of recovery were bidirectional: secondary succession from the control into the disturbance corridor and inhibition from the verge in the direction of the control. Time estimated for species composition to resemble the control is dependent on location within the disturbance corridor and could be centuries at the road verge. Our findings have applications to other deserts.

California↗

USGS2015

Bidirectional recovery patterns of Mojave Desert vegetation in an aqueduct pipeline corridor after 36 years: II. Annual plants

We studied recovery of winter annual plants in a 97-m wide disturbed aqueduct corridor in the Mojave Desert 36 years after construction. We established plots at 0, 20, and 40 m from the road verge at the corridor center and at 100 m in undisturbed vegetation. We recorded 47 annual species, of which 41 were native and six were exotic. Exotic species composed from 64 to 91% of total biomass. We describe a bilateral process of recovery: from the road verge to the outward edge of the corridor and from undisturbed habitat into the corridor. Native annual plants significantly increased in richness from road verge to undisturbed vegetation, but not in density, biomass, or cover. In contrast, exotic annual plants increased in density, biomass, cover and richness with increasing distance from the road verge. The species of colonizing shrubs and type of canopy cover affected density, biomass, and richness of annuals. Species composition of native annuals differed significantly by distance, suggesting secondary succession. In general, native annuals were closer to achieving recovery on the 40-m plots than at the road verge. Recovery estimates were in centuries and dependent on location, canopy type, and whether considering all annuals or natives only.

Journal of Arid Environments↗

USGS2015

Factors affecting the thermal environment of Agassiz’s Desert Tortoise ( Gopherus agassizii ) cover sites in the Central Mojave Desert during periods of temperature extremes

Agassiz's Desert Tortoises (Gopherus agassizii) spend >95% of their lives underground in cover sites that serve as thermal buffers from temperatures, which can fluctuate >40°C on a daily and seasonal basis. We monitored temperatures at 30 active tortoise cover sites within the Soda Mountains, San Bernardino County, California, from February 2004 to September 2006. Cover sites varied in type and structural characteristics, including opening height and width, soil cover depth over the opening, aspect, tunnel length, and surficial geology. We focused our analyses on periods of extreme temperature: in summer, between July 1 and September 1, and winter, between November 1 and February 15. With the use of multivariate regression tree analyses, we found cover-site temperatures were influenced largely by tunnel length and subsequently opening width and soil cover. Linear regression models further showed that increasing tunnel length increased temperature stability and dampened seasonal temperature extremes. Climate change models predict increased warming for southwestern North America. Cover sites that buffer temperature extremes and fluctuations will become increasingly important for survival of tortoises. In planning future translocation projects and conservation efforts, decision makers should consider habitats with terrain and underlying substrate that sustain cover sites with long tunnels and expanded openings for tortoises living under temperature extremes similar to those described here or as projected in the future.

California↗

USGS2015

Gopherus agassizii (Agassiz's Desert Tortoise). Attempted predation.

No abstract available.

Herpetological Review↗

USGS2014

Distance to human populations influences epidemiology of respiratory disease in desert tortoises

We explored variables likely to affect health of Agassiz's desert tortoises (Gopherus agassizii) in a 1,183-km2 study area in the central Mojave Desert of California between 2005 and 2008. We evaluated 1,004 tortoises for prevalence and spatial distribution of 2 pathogens, Mycoplasma agassizii and M. testudineum, that cause upper respiratory tract disease. We defined tortoises as test-positive if they were positive by culture and/or DNA identification or positive or suspect for specific antibody for either of the two pathogens. We used covariates of habitat (vegetation, elevation, slope, and aspect), tortoise size and sex, distance from another test-positive tortoise, and anthropogenic variables (distances to roads, agricultural areas, playas, urban areas, and centroids of human-populated census blocks). We used both logistic regression models and regression trees to evaluate the 2 species of Mycoplasma separately. The prevalence of test-positive tortoises was low: 1.49% (15/1,004) for M. agassizii and 2.89% (29/1,004) for M. testudineum. The spatial distributions of test-positive tortoises for the 2 Mycoplasma species showed little overlap; only 2 tortoises were test-positive for both diseases. However, the spatial distributions did not differ statistically between the 2 species. We consistently found higher prevalence of test-positive tortoises with shorter distances to centroids of human-populated census blocks. The relationship between distance to human-populated census blocks and tortoises that are test-positive for M. agassizii and potentially M. testudineum may be related to release or escape of captive tortoises because the prevalence of M. agassizii in captive tortoises is high. Our findings have application to other species of chelonians where both domestic captive and wild populations exist. Published 2014. This article is a U.S. Government work and is in the public domain in the USA.

Journal of Wildlife Management↗

USGS2010

Effects of subsidized predators, resource variability, and human population density on desert tortoise populations in the Mojave Desert, USA

Understanding predator–prey relationships can be pivotal in the conservation of species. For 2 decades, desert tortoise Gopherus agassizii populations have declined, yet quantitative evidence regarding the causes of declines is scarce. In 2005, Ft. Irwin National Training Center, California, USA, implemented a translocation project including 2 yr of baseline monitoring of desert tortoises. Unusually high predation on tortoises was observed after translocation occurred. We conducted a retrospective analysis of predation and found that translocation did not affect the probability of predation: translocated, resident, and control tortoises all had similar levels of predation. However, predation rates were higher near human population concentrations, at lower elevation sites, and for smaller tortoises and females. Furthermore, high mortality rates were not limited to the National Training Center. In 2008, elevated mortality (as high as 43%) occurred throughout the listed range of the desert tortoise. Although no temporal prey base data are available for analysis from any of the study sites, we hypothesize that low population levels of typical coyote Canis latrans prey (i.e. jackrabbits Lepus californicus and other small animals) due to drought conditions influenced high predation rates in previous years. Predation may have been exacerbated in areas with high levels of subsidized predators. Many historical reports of increased predation, and our observation of a range-wide pattern, may indicate that high predation rates are more common than generally considered and may impact recovery of the desert tortoise throughout its range.

Endangered Species Research↗

USGS2006

Introduction to the special issue on the changing Mojave Desert

The Mojave Desert, which lies between the Great Basin Desert in the north and the Sonoran Desert in the south, covers an estimated 114 478–130 464 km 2 of the south-western United States and includes parts of the states of Nevada, Utah, Arizona, and California, with the amount of land mass dependent on the definition ( Fig. 1 ; Rowlands et al., 1982 ; McNab and Avers, 1994 ; Bailey, 1995 ; Groves et al., 2000 ). This desert is sufficiently diverse to be subdivided into five regions: northern, south-western, central, south-central, and eastern ( Rowlands et al., 1982 ). It is a land of extremes both in topography and climate. Elevations range from below sea level at Death Valley National Park to 3633 m on Mt. Charleston in the Spring Range of Nevada. Temperatures exhibit similar extreme ranges with mean minimum January temperatures of −2.4 °C in Beatty, Nevada and mean maximum July temperatures of 47 °C in Death Valley. Mean annual precipitation varies throughout the regions (42–350 mm), is highest on mountain tops, but overall is low ( Rowlands et al., 1982 ; Rowlands, 1995a ). The distribution of precipitation varies from west to east and north to south, with >85% of rain falling in winter in the northern, south-western and south-central regions. In contrast, the central and eastern regions receive a substantial amount of precipitation in both winter and summer. The variability in topographic and climatic features contributes to regional differences in vegetation.

Arizona, California, Nevada, Utah↗