Geology topics

Jeffrey S. Schaeffer

Publications and source records attributed to Jeffrey S. Schaeffer.

9 recordsLinked to original sources

USGS2017

Community stability within the St. Marys River fish community: Evidence from trawl surveys

A trawl survey was conducted in the Saint Marys River during 2010–2011 and we compared our results to a prior trawl survey conducted during 1979–1983 to look for long-term changes in the fish community, especially in terms of changes induced by invasive species. We found no substantive temporal differences in fish density, fish biomass, or fish diversity; lower trawl biomass during 2010–2011 was likely a result of day versus night trawling. The Saint Marys River remains a center of high fish diversity, invasive species remain rare, and the system continues to exhibit overall long-term stability. Trawling captured a wide range of fish species, but was likely not an effective stock assessment tool for managed game fish because catch rates were low or variable for all game species except yellow perch. Trawling appeared to be an effective tool for sampling connecting channel diversity, especially when large numbers of individuals are needed for directed studies, but annual sampling would be needed to use data to assess recruitment.

St. Marys River↗

USGS2014

Development of a spatially universal framework for classifying stream assemblages with application to conservation planning for Great Lakes lotic fish communities

Classifications are typically specific to particular issues or areas, leading to patchworks of subjectively defined spatial units. Stream conservation is hindered by the lack of a universal habitat classification system and would benefit from an independent hydrology-guided spatial framework of units encompassing all aquatic habitats at multiple spatial scales within large regions. We present a system that explicitly separates the spatial framework from any particular classification developed from the framework. The framework was constructed from landscape variables that are hydrologically and biologically relevant, covered all space within the study area, and was nested hierarchically and spatially related at scales ranging from the stream reach to the entire region; classifications may be developed from any subset of the 9 basins, 107 watersheds, 459 subwatersheds, or 10,000s of valley segments or stream reaches. To illustrate the advantages of this approach, we developed a fish-guided classification generated from a framework for the Great Lakes region that produced a mosaic of habitat units which, when aggregated, formed larger patches of more general conditions at progressively broader spatial scales. We identified greater than 1,200 distinct fish habitat types at the valley segment scale, most of which were rare. Comparisons of biodiversity and species assemblages are easily examined at any scale. This system can identify and quantify habitat types, evaluate habitat quality for conservation and/or restoration, and assist managers and policymakers with prioritization of protection and restoration efforts. Similar spatial frameworks and habitat classifications can be developed for any organism in any riverine ecosystem.

Michigan, Minnesota, New York, Ohio, Wisconsin↗

USGS2012

Use of a storm water retention system for conservation of regionally endangered fishes

Maintaining aquatic biodiversity in urban or suburban areas can be problematic because urban landscapes can be nearly devoid of aquatic habitats other than engineered basins for storm water management. These areas are usually of questionable value for fish, but we examined a case study in which five regionally imperiled fish species were reintroduced into an artificial storm water detention pond and subsequently thrived. Although not a formal experiment, postintroduction survey data suggested that three of the five species maintained high population densities for 10 years after initial stocking, and two persisted in lower numbers. Success was likely due to a combination of unique design features and prior habitat preparation that resulted in clear water conditions that supported dense vegetation. Stocked fish persisted despite occasional bouts of low dissolved oxygen and increased chloride levels resulting from road salt application within the watershed. Transplanted fish served as a source population for both research and further reintroduction experiments. We suggest that, for some fish species, habitat preservation has a middle ground between natural habitats and completely artificial environments that require constant husbandry and that storm water systems could be used to create engineered sanctuaries within the human landscape that have many potential benefits for both humans and fish.

Fisheries↗

USGS2012

Relationship between mid-water trawling effort and catch composition uncertainty in two large lakes (Huron and Michigan) dominated by alosines, osmerids, and coregonines

Because it is not possible to identify species with echosounders alone, trawling is widely used as a method for collecting species and size composition data for allocating acoustic fish density estimates to species or size groups. In the Laurentian Great Lakes, data from midwater trawls are commonly used for such allocations. However, there are no rules for how much midwater trawling effort is required to adequately describe species and size composition of the pelagic fish communities in these lakes, so the balance between acoustic sampling effort and trawling effort has been unguided. We used midwater trawl data collected between 1986 and 2008 in lakes Michigan and Huron and a variety of analytical techniques to develop guidance for appropriate levels of trawl effort. We used multivariate regression trees and re-sampling techniques to i. identify factors that influence species and size composition of the pelagic fish communities in these lakes, ii. identify stratification schemes for the two lakes, iii. determine if there was a relationship between uncertainty in catch composition and the number of tows made, and iv. predict the number of tows required to reach desired uncertainty targets. We found that depth occupied by fish below the surface was the most influential explanatory variable. Catch composition varied between lakes at depths <38.5 m below the surface, but not at depths ≥38.5 m below the surface. Year, latitude, and bottom depth influenced catch composition in the near-surface waters of Lake Michigan, while only year was important for Lake Huron surface waters. There was an inverse relationship between RSE [relative standard error = 100 × (SE/mean)] and the number of tows made for the proportions of the different size and species groups. We found for the fifth (Lake Huron) and sixth (Lake Michigan) largest lakes in the world, 15–35 tows were adequate to achieve target RSEs (15% and 30%) for ubiquitous species, but rarer species required much higher, and at times, impractical effort levels to reach these targets.

Fisheries Research↗

USGS2012

Influences on Bythotrephes longimanus life-history characteristics in the Great Lakes

We compared Bythotrephes population demographics and dynamics to predator (planktivorous fish) and prey (small-bodied crustacean zooplankton) densities at a site sampled through the growing season in Lakes Michigan, Huron, and Erie. Although seasonal average densities of Bythotrephes were similar across lakes (222/m 2 Erie, 247/m 2 Huron, 162/m 2 Michigan), temporal trends in abundance differed among lakes. In central Lake Erie where Bythotrephes ' prey assemblage was dominated by small individuals (60%), where planktivorous fish densities were high (14,317/ha), and where a shallow water column limited availability of a deepwater refuge, the Bythotrephes population was characterized by a small mean body size, large broods with small neonates, allocation of length increases mainly to the spine rather than to the body, and a late summer population decline. By contrast, in Lake Michigan where Bythotrephes ' prey assemblage was dominated by large individuals (72%) and planktivorous fish densities were lower (5052/ha), the Bythotrephes population was characterized by a large mean body size (i.e., 37–55% higher than in Erie), small broods with large neonates, nearly all growth in body length occurring between instars 1 and 2, and population persistence into fall. Life-history characteristics in Lake Huron tended to be intermediate to those found in Lakes Michigan and Erie, reflecting lower overall prey and predator densities (1224/ha) relative to the other lakes. Because plasticity in life history can affect interactions with other species, our findings point to the need to understand life-history variation among Great Lakes populations to improve our ability to model the dynamics of these ecosystems.

Great Lakes↗

USGS2011

Predicting future changes in Muskegon River Watershed game fish distributions under future land cover alteration and climate change scenarios

Future alterations in land cover and climate are likely to cause substantial changes in the ranges of fish species. Predictive distribution models are an important tool for assessing the probability that these changes will cause increases or decreases in or the extirpation of species. Classification tree models that predict the probability of game fish presence were applied to the streams of the Muskegon River watershed, Michigan. The models were used to study three potential future scenarios: (1) land cover change only, (2) land cover change and a 3°C increase in air temperature by 2100, and (3) land cover change and a 5°C increase in air temperature by 2100. The analysis indicated that the expected change in air temperature and subsequent change in water temperatures would result in the decline of coldwater fish in the Muskegon watershed by the end of the 21st century while cool- and warmwater species would significantly increase their ranges. The greatest decline detected was a 90% reduction in the probability that brook trout Salvelinus fontinalis would occur in Bigelow Creek. The greatest increase was a 276% increase in the probability that northern pike Esox lucius would occur in the Middle Branch River. Changes in land cover are expected to cause large changes in a few fish species, such as walleye Sander vitreus and Chinook salmon Oncorhynchus tshawytscha, but not to drive major changes in species composition. Managers can alter stream environmental conditions to maximize the probability that species will reside in particular stream reaches through application of the classification tree models. Such models represent a good way to predict future changes, as they give quantitative estimates of the n-dimensional niches for particular species.

Michigan↗

USGS2011

Long-term trends in the St. Marys River open water fish community

We examined trends in species composition and abundance of the St. Marys River fish community. Abundance data were available approximately once every six years from 1975 through 2006, and size and age data were available from 1995 through 2006. We also compared survey data in 2006 with results of a concurrent creel survey that year, as well as data from prior surveys spanning a 69 year time frame. The St. Marys River fish community was best characterized as a coolwater fish community with apparent little variation in species composition, and only slight variation in overall fish abundance since 1975. However, we did find recent trends in abundance among target species sought by anglers: centrarchids increased, percids appeared stable, and both northern pike Esox lucius and cisco Coregonus artedii declined. Survey results suggested that walleye ( Sander vitreus ) and yellow perch ( Perca flavescens ) experienced moderate exploitation but benefited from recent strong recruitment and faster growth. Mechanisms underlying declines of northern pike and cisco were not clear; reduced abundance could have resulted from high exploitation, variation in recruitment, or a combination of both factors. Despite these challenges, the St. Marys River fish community appears remarkably stable. We suggest that managers insure that creel surveys occur simultaneously with assessments, but periodic gill net surveys may no longer provide adequate data in support of recent, more complex management objectives. While additional surveys would add costs, more frequent data might ensure sustainability of a unique fish community that supports a large proportion of angler effort on Lake Huron.

Michigan;Ontario↗

USGS2002

Performance of barbed and barbless hooks in a marine recreational fishery

We used an angling study to examine catch per unit effort (CPUE), bait loss, and total landings by anglers fishing with natural bait on barbed and barbless hooks in a nearshore marine sport fishery located in the Gulf of Mexico near St. Petersburg, Florida. Anglers fished half the day with a barbed hook and half the day with a barbless hook. We also recorded anatomical hook placement, severity of injury or bleeding, and hook extraction times for each landed fish. Bait loss, CPUE, and mean length of catch did not differ between gears, but anglers landed 22% more fish with barbed hooks. Loss of hooked fish was significantly higher with barbless hooks, and efficiency appeared to vary among species. Mean unhooking times were significantly shorter with barbless hooks. Anatomical hook placement did not differ between gears and most fish were hooked in the jaws. Bleeding did not differ between gears because bleeding was influenced strongly by hook placement, but barbless hooks reduced unhooking injuries. In this fishery, barbless hooks probably did not reduce hooking mortality and conferred only slight benefits at the expense of reduced catches.

North American Journal of Fisheries Management↗

USGS2000

Effects of long-term changes in the benthic community on yellow perch in Saginaw Bay, Lake Huron

Abundance, mortality, age and growth, food habits, and energetics of a yellow perch Perca flavescens population were investigated in eutrophic Saginaw Bay, Lake Huron during May to October, 1986 to 1988, and compared population characteristics with historical data from times when eutrophic conditions were less severe. During 1986 to 1988, yellow perch were abundant, but grew slowly and experienced high natural mortality. A size threshold was present at 150 to 180 mm beyond which few individuals survived, and sex ratios became biased toward males. An energetic model suggested that yellow perch were food limited; as they increased in size they spent a greater proportion of the growing season near maintenance ration. Low feeding rates were a consequence of subsistence on small chironomid larvae. Piscivory provided little energetic relief. Historical data suggested that availability of large benthic prey such as nymphs of the burrowing mayfly Hexagenia was important to yellow perch. Yellow perch formerly consumed Hexagenia, but mayflies were extirpated from Saginaw Bay during 1953 to 1965, and never recovered. When Hexagenia was present, yellow perch growth was moderate to fast depending on population size, size thresholds were not present, and yellow perch reached large size and older age despite moderate to high fishing mortality. Decreases in yellow perch growth rates during 1952 to 1955 coincided with extirpation of Hexagenia. Fast growth of yellow perch did occur after Hexagenia became extirpated, but only when fishing mortality was high, population size was small, and some large benthic invertebrates remained. Eutrophication of Saginaw Bay appeared to affect yellow perch by changing species composition and reducing size structure of the benthic community.

Michigan↗