Geology topics

James R. Jackson

Publications and source records attributed to James R. Jackson.

6 recordsLinked to original sources

USGS2026

A decision analytic approach to hierarchical decisions for double-crested cormorant conflict resolution

Double-crested cormorants ( Nannopterum auritum ) are piscivorous, migratory waterbirds that often conflict with fisheries interests in North America, stemming from depredation effects on fish populations. A new permitting process in the United States allows natural resource agencies to request permits for lethal take of cormorants in special instances like depredation of managed fish stocks. This rule does not include guidance for when cormorant take might be actionable. We developed a hierarchical structured decision making (SDM) framework for evaluating whether, when, and how much cormorant take might be necessary. A broad-scale, or “umbrella,” SDM framework established the overarching problem, objectives that likely are relevant for permitting decisions (i.e., minimizing loss of ability to harvest fish and sustaining cormorant presence on the landscape), and methods for evaluating the extent of management that might be necessary. A local-scale SDM process can then be applied for individual systems to determine the need for and magnitude of a permit request. We provide an example of such a local-scale SDM process for Brevoort Lake, Michigan, United States, where walleye ( Sander vitreus ) are sustained through stocking. We found that decisions for cormorant permitting on Brevoort Lake were influenced by uncertainties about the level of cormorant feeding on walleye, per capita level of daily cormorant consumption, number of days the cormorants spent feeding on the lake, and number of walleye stocked in the lake. This case study highlights the importance of uncertainty and risk in decisions for cormorant management, both of which can be accounted for more fully within the SDM framework.

Environment Systems and Decisions↗

USGS2022

Indicators of fish population responses to avian predation with focus on double-crested cormorants

Double-crested cormorants (Nannopterum auritum) have been implicated as causes of fish population declines in many locations across their breeding range. Two challenges facing managers are identifying fisheries population metrics indicative of cormorant impacts and determining when this evidence becomes actionable. Building upon existing studies, we conducted a meta-analysis of eight data-rich systems across the Laurentian Great Lakes region of the United States for common fish population responses to changes in cormorant abundance. Specifically, we examined trends in mean total female length at age-3 (TL3), female mean length and age at 50 % maturity, and mean age evenness as indicated by Shannon’s Equitability Index. Annual observations for these metrics were independently regressed linearly against cormorant density by system for walleye (Sander vitreus), yellow perch (Perca flavescens), smallmouth bass (Micropterus dolomieu), and northern pike (Esox lucius) populations. TL3 was the most sensitive with 9 of the 14 datasets statistically significant (r2 range 0.29 to 0.86). Maturity metrics were moderately sensitive to trends in cormorant predation with mean total length at 50 % maturity significant in 4 out of 11 datasets (r2 range 0.27–0.41) and mean age at 50 % maturity significant in 3 out of 11 datasets (r2 range 0.12 – 0.51). Least sensitive was age evenness with the Shannon Index significant in 3 out of 12 datasets (r2 typically < 0.25). Of metrics tested, TL3 was the most reliable indicator of changes in cormorant effects despite varying system changes and management responses among locations.

Michigan, Minnesota, New York↗

USGS2017

LAGOS-NE: a multi-scaled geospatial and temporal database of lake ecological context and water quality for thousands of US lakes

Understanding the factors that affect water quality and the ecological services provided by freshwater ecosystems is an urgent global environmental issue. Predicting how water quality will respond to global changes not only requires water quality data, but also information about the ecological context of individual water bodies across broad spatial extents. Because lake water quality is usually sampled in limited geographic regions, often for limited time periods, assessing the environmental controls of water quality requires compilation of many data sets across broad regions and across time into an integrated database. LAGOS-NE accomplishes this goal for lakes in the northeastern-most 17 US states. LAGOS-NE contains data for 51 101 lakes and reservoirs larger than 4 ha in 17 lake-rich US states. The database includes 3 data modules for: lake location and physical characteristics for all lakes; ecological context (i.e., the land use, geologic, climatic, and hydrologic setting of lakes) for all lakes; and in situ measurements of lake water quality for a subset of the lakes from the past 3 decades for approximately 2600–12 000 lakes depending on the variable. The database contains approximately 150 000 measures of total phosphorus, 200 000 measures of chlorophyll, and 900 000 measures of Secchi depth. The water quality data were compiled from 87 lake water quality data sets from federal, state, tribal, and non-profit agencies, university researchers, and citizen scientists. This database is one of the largest and most comprehensive databases of its type because it includes both in situ measurements and ecological context data. Because ecological context can be used to study a variety of other questions about lakes, streams, and wetlands, this database can also be used as the foundation for other studies of freshwaters at broad spatial and ecological scales.

Connecticut, Iowa, Illinois, Indiana, Massachusett↗

USGS2017

Using variance structure to quantify responses to perturbation in fish catches

We present a case study evaluation of gill-net catches of Walleye Sander vitreus to assess potential effects of large-scale changes in Oneida Lake, New York, including the disruption of trophic interactions by double-crested cormorants Phalacrocorax auritus and invasive dreissenid mussels. We used the empirical long-term gill-net time series and a negative binomial linear mixed model to partition the variability in catches into spatial and coherent temporal variance components, hypothesizing that variance partitioning can help quantify spatiotemporal variability and determine whether variance structure differs before and after large-scale perturbations. We found that the mean catch and the total variability of catches decreased following perturbation but that not all sampling locations responded in a consistent manner. There was also evidence of some spatial homogenization concurrent with a restructuring of the relative productivity of individual sites. Specifically, offshore sites generally became more productive following the estimated break point in the gill-net time series. These results provide support for the idea that variance structure is responsive to large-scale perturbations; therefore, variance components have potential utility as statistical indicators of response to a changing environment more broadly. The modeling approach described herein is flexible and would be transferable to other systems and metrics. For example, variance partitioning could be used to examine responses to alternative management regimes, to compare variability across physiographic regions, and to describe differences among climate zones. Understanding how individual variance components respond to perturbation may yield finer-scale insights into ecological shifts than focusing on patterns in the mean responses or total variability alone.

Transactions of the American Fisheries Society↗

USGS2014

Modeling turbidity type and intensity effects on the growth and starvation mortality of age-0 yellow perch

We sought to quantify the possible population-level influence of sediment plumes and algal blooms on yellow perch (Perca flavescens), a visual predator found in systems with dynamic water clarity. We used an individual-based model (IBM), which allowed us to include variance in water clarity and the distribution of individual sizes. Our IBM was built with laboratory data showing that larval yellow perch feeding rates increased slightly as sediment turbidity level increased, but that both larval and juvenile yellow perch feeding rates decreased as phytoplankton level increased. Our IBM explained a majority of the variance in yellow perch length in data from the western and central basins of Lake Erie and Oneida Lake, with R2 values ranging from 0.611 to 0.742. Starvation mortality was size dependent, as the greatest daily mortality rates in each simulation occurred within days of each other. Our model showed that turbidity-dependent consumption rates and temperature are key components in determining growth and starvation mortality of age-0 yellow perch, linking fish production to land-based processes that influence water clarity. These results suggest the timing and persistence of sediment plumes and algal blooms can drastically alter the growth potential and starvation mortality of a yellow perch cohort.

Western and Central Lake Erie; Oneida Lake↗

USGS2010

Worldwide status of burbot and conservation measures

Although burbot ( Lota lota Gadidae ) are widespread and abundant throughout much of their natural range, there are many populations that have been extirpated, endangered or are in serious decline. Due in part to the species’ lack of popularity as a game and commercial fish, few regions consider burbot in management plans. We review the worldwide population status of burbot and synthesize reasons why some burbot populations are endangered or declining, some burbot populations have recovered and some burbot populations do not recover despite management measures. Burbot have been extirpated in much of Western Europe and the United Kingdom and are threatened or endangered in much of North America and Eurasia. Pollution and habitat change, particularly the effects of dams, appear to be the main causes for declines in riverine burbot populations. Pollution and the adverse effects of invasive species appear to be the main reasons for declines in lacustrine populations. Warmer water temperatures, due either to discharge from dams or climate change, have been noted in declining burbot populations at the southern extent of their range. Currently, fishing pressure does not appear to be limiting burbot populations world-wide. We suggest mitigation measures for burbot population recovery, particularly those impacted by dams and invasive species.

Fish and Fisheries↗