Geology topics

James L. Zajicek

Publications and source records attributed to James L. Zajicek.

13 recordsLinked to original sources

USGS2023

Genetic basis of thiaminase I activity in a vertebrate, zebrafish Danio rerio

Thiamine (vitamin B 1 ) metabolism is an important driver of human and animal health and ecological functioning. Some organisms, including species of ferns, mollusks, and fish, contain thiamine-degrading enzymes known as thiaminases, and consumption of these organisms can lead to thiamine deficiency in the consumer. Consumption of fish containing thiaminase has led to elevated mortality and recruitment failure in farmed animals and wild salmonine populations around the world. In the North American Great Lakes, consumption of the non-native prey fish alewife ( Alosa pseudoharengus ) by native lake trout ( Salvelinus namaycush ) led to thiamine deficiency in the trout, contributed to elevated fry mortality, and impeded natural population recruitment. Several thiaminases have been genetically characterized in bacteria and unicellular eukaryotes, and the source of thiaminase in multicellular organisms has been hypothesized to be gut microflora. In an unexpected discovery, we identified thiaminase I genes in zebrafish ( Danio rerio ) with homology to bacterial tenA thiaminase II. The biochemical activity of zebrafish thiaminase I (GenBank NP_001314821.1) was confirmed in a recombinant system. Genes homologous to the zebrafish tenA-like thiaminase I were identified in many animals, including common carp ( Cyprinus carpio ), zebra mussel ( Dreissena polymorpha ) and alewife. Thus, the source of thiaminase I in alewife impacting lake trout populations is likely to be de novo synthesis.

Scientific Reports↗

USGS2020

Effects of early life stage exposure of largemouth bass to atrazine or a model estrogen (17α-ethinylestradiol)

Endocrine disrupting contaminants are of continuing concern for potentially contributing to reproductive dysfunction in largemouth and smallmouth bass in the Chesapeake Bay watershed (CBW) and elsewhere. Exposures to atrazine (ATR) have been hypothesized to have estrogenic effects on vertebrate endocrine systems. The incidence of intersex in male smallmouth bass from some regions of CBW has been correlated with ATR concentrations in water. Fish early life stages may be particularly vulnerable to ATR exposure in agricultural areas, as a spring influx of pesticides coincides with spawning and early development. Our objectives were to investigate the effects of early life stage exposure to ATR or the model estrogen 17α-ethinylestradiol (EE2) on sexual differentiation and gene expression in gonad tissue. We exposed newly hatched largemouth bass (LMB, Micropterus salmoides ) from 7 to 80 days post-spawn to nominal concentrations of 1, 10, or 100 µg ATR/L or 1 or 10 ng EE2/L and monitored histological development and transcriptomic changes in gonad tissue. We observed a nearly 100% female sex ratio in LMB exposed to EE2 at 10 ng/L, presumably due to sex reversal of males. Many gonad genes were differentially expressed between sexes. Multidimensional scaling revealed clustering by gene expression of the 1 ng EE2/L and 100 µg ATR/L-treated male fish. Some pathways responsive to EE2 exposure were not sex-specific. We observed differential expression in male gonad in LMB exposed to EE2 at 1 ng/L of several genes involved in reproductive development and function, including star , cyp11a2 , ddx4 (previously vasa ), wnt5b , cyp1a and samhd1 . Expression of star , cyp11a2 and cyp1a in males was also responsive to ATR exposure. Overall, our results confirm that early development is a sensitive window for estrogenic endocrine disruption in LMB and are consistent with the hypothesis that ATR exposure induces some estrogenic responses in the developing gonad. However, ATR-specific and EE2-specific responses were also observed.

New York, Pennsylvania, Maryland, West Virginia, V↗

USGS2020

Thiamine concentrations in lake trout and Atlantic salmon eggs during 14 years following the invasion of alewife in Lake Champlain

Thiamine (vitamin B 1 ) deficiency in Great Lakes salmonines has been linked to consumption of alewife Alosa pseudoharengus . Thiamine deficiency has been recognized as a possible impediment to lake trout Salvelinus namaycush recruitment in the Great Lakes and Atlantic salmon Salmo salar recruitment in the Finger Lakes and Baltic Sea. Alewife invaded Lake Champlain in 2003 which provided an opportunity to investigate changes in thiamine concentrations in salmonine predators during an alewife invasion. We monitored egg unphosphorylated and total thiamine concentrations in lake trout and Atlantic salmon in 2004 and 2007–2019, assessed whether concentrations were associated with mortality, and examined thiaminase activity in alewife. Total thiamine concentrations in lake trout and Atlantic salmon were significantly lower than in 2004 for seven of the ten collection years for lake trout and for nine of the 12 collection years for Atlantic salmon. Mortality and signs of thiamine deficiency were observed in laboratory-reared Atlantic salmon free embryos but not in lake trout. Average thiaminase activity in adult alewife declined from 5200 pmol/g/min in 2006 to 1500 pmol/g/min in 2012. Our results provide further evidence that a diet that includes alewife reduces egg thiamine concentrations in salmonines. This effect was observed within four years of the invasion of alewife.

Vermont↗

USGS2013

TanA: a fluorogenic probe for thiaminase activity

A fluorogenic thiamine analogue is presented as a fluorescent probe for thiaminase activity. The emission of the fluorophore is quenched by photoinduced electron transfer (PET) to the N-substituted pyridinium portion of the probe. Action of the enzyme releases the free pyridine group causing a substantial increase in fluorescence.

Analytical Methods↗

USGS2012

Paenibacillus thiaminolyticus is not the cause of thiamine deficiency impeding lake trout ( Salvelinus namaycush ) recruitment in the Great Lakes

Thiamine (vitamin B 1 ) deficiency is a global concern affecting wildlife, livestock, and humans. In Great Lakes salmonines, thiamine deficiency causes embryo mortality and is an impediment to restoration of native lake trout ( Salvelinus namaycush ) stocks. Thiamine deficiency in fish may result from a diet of prey with high levels of thiaminase I. The discoveries that the bacterial species Paenibacillus thiaminolyticus produces thiaminase I, is found in viscera of thiaminase-containing prey fish, and causes mortality when fed to lake trout in the laboratory provided circumstantial evidence implicating P. thiaminolyticus . This study quantified the contribution of P. thiaminolyticus to the total thiaminase I activity in multiple trophic levels of Great Lakes food webs. Unexpectedly, no relationship between thiaminase activity and either the amount of P. thiaminolyticus thiaminase I protein or the abundance of P. thiaminolyticus cells was found. These results demonstrate that P. thiaminolyticus is not the primary source of thiaminase activity affecting Great Lakes salmonines and calls into question the long-standing assumption that P. thiaminolyticus is the source of thiaminase in other wild and domestic animals.

Great Lakes↗

USGS2009

Thiamine deficiency effects on the vision and foraging ability of lake trout fry

The exact causes of the historical recruitment failures of Great Lakes lake trout Salvelinus namaycush are unknown. Thiamine deficiency has been associated with neurological abnormalities in lake trout that lead to early mortality syndrome (EMS) in salmonine swim-up fry, and EMS-related mortality at the swim-up stage is a factor that contributes to the reproductive failure of lake trout populations in the Great Lakes. The potential for adverse effects of thiamine deficiency beyond the swim-up stage is unknown. We investigated the effects of low egg thiamine on behavioral functions in young, post-swim-up lake trout fry. The behavioral endpoints included visual acuity and prey capture rates in the same groups of lake trout fry from each family. Low-thiamine eggs were produced by feeding lake trout broodstock diets entailing thiaminase activity. The thiamine content of the spawned eggs ranged from 0.3 to 26.1 nmol/g. Both visual acuity and prey capture rates were affected by the thiamine content of the eggs. The visual acuity of lake trout was severely affected by low egg thiamine, mainly at thiamine concentrations below the threshold of 0.8 nmol/g but also at higher concentrations in field-collected eggs. Feeding was also reduced with low egg thiamine content. The reduction of prey capture rates was dramatic below 0.8 nmol/g and less dramatic, but still significant, in a portion of the families with egg thiamine concentrations of less than 5.0 nmol/g from both laboratory and field samples. Approximately one-third of the latter families had reduced feeding rates. Deficits in visual acuity may be part of the mechanism leading to decreased feeding rates in these fry. The effects of low egg thiamine on both of the behavioral endpoints studied increase the risk of low recruitment rates in Great Lakes lake trout populations.

Journal of Aquatic Animal Health↗

USGS2009

Application of enzyme-linked immunosorbent assay for measurement of polychlorinated biphenyls from hydrophobic solutions: Extracts of fish and dialysates of semipermeable membrane devices: Chapter 26

Determination of PCBs in biological tissue extracts by enzyme-linked immunosorbent assays (ELISAs) can be problematic, since the hydrophobic solvents used for their extraction and isolation from interfering biochemicals have limited compatibility with the polar solvents (e.g. methanol/water) and the immunochemical reagents used in ELISA. Our studies of these solvent effects indicate that significant errors can occur when microliter volumes of PCB containing extracts, in hydrophobic solvents, are diluted directly into methanol/water diluents. Errors include low recovery and excess variability among sub-samples taken from the same sample dilution. These errors are associated with inhomogeneity of the dilution, which is readily visualized by the use of a hydrophobic dye, Solvent Blue 35. Solvent Blue 35 is also used to visualize the evaporative removal of hydrophobic solvent and the dissolution of the resulting PCB/dye residue by pure methanol and 50% (v/v) methanol/water, typical ELISA diluents. Evaporative removal of isooctane by an ambient temperature nitrogen purge with subsequent dissolution in 100% methanol gives near quantitative recovery of model PCB congeners. We also compare concentrations of total PCBs from ELISA (ePCB) to their corresponding concentrations determined from capillary gas chromatography (GC) in selected fish sample extracts and dialysates of semipermeable membrane device (SPMD) passive samplers using an optimized solvent exchange procedure. Based on Aroclor 1254 calibrations, ePCBs (ng/mL) determined in fish extracts are positively correlated with total PCB concentrations (ng/mL) determined by GC: ePCB = 1.16 * total-cPCB - 5.92. Measured ePCBs (ng/3 SPMDs) were also positively correlated (r 2 = 0.999) with PCB totals (ng/3 SPMDs) measured by GC for dialysates of SPMDs: ePCB = 1.52 * total PCB - 212. Therefore, this ELISA system for PCBs can be a rapid alternative to traditional GC analyses for determination of PCBs in extracts of biota or in SPMD dialysates.

Book chapter↗

USGS2007

Chemical contamination of the Rybinsk Reservoir, northwest Russia: Relationship between liver polychlorinated biphenyls (PCB) content and health indicators in bream (Abramis brama)

The Rybinsk Reservoir (Russia) is the largest artificial waterbody in Europe (4550 km 2 ) and provides drinking water for population of the cities located along the coast line. Industrialization in Cherepovets at the northeastern portion of the reservoir, including one of the largest metallurgical facilities in Europe, has resulted in chemical contamination of the reservoir. The extent of polychlorinated biphenyls (PCB) contamination in bream liver, a common fish species, taken from six locations in the Rybinsk Reservoir and Volga River, and biochemical and morphometric biomarkers of fish health were investigated. Liver PCB concentrations ranged from non-detected to 3.4 μg/g wet wt of liver, with the greatest concentrations found in fish taken near the industrialized area in Sheksna Reach of Rybinsk Reservoir. The source of the bream contamination is the PCB pollution of bottom organisms and sediments conditioned with industrialization facilities of Cherepovets. The patterns of the PCB congeners in the livers of bream taken near Cherepovets were similar at all of the stations that were sampled around the reservoir and Volga River. Among the common fish health biomarkers used only liver total ChE activity and liver-somatic index in bream near Cherepovets can reflect environmental pollution. Other morphometric (FCF, Clark’s condition factors, and spleen-somatic index) and biochemical (protein content and acetylcholinesterase activity in the brain) biomarkers related with fish health varied among locations, but were not correlated to the concentrations of PCBs in the bream livers.

Rybinsk Reservoir↗

USGS1996

Use of the semipermeable membrane device (SPMD) to sample polycyclic aromatic hydrocarbon pollution in a lotic system

Relative concentrations of aqueous polycyclic aromatic hydrocarbons (PAH) were investigated in an urban creek. Samples were obtained at five sites within a 600-m segment of the creek that is critical habitat for an endangered species of fish. the sampling technique entailed immersion of semipermeable membrane devices (SPMDs) in the water for intervals as long as 64 d. SPMDs are passive, in situ , mtegrative samplers of bioavailable (truly dissolved) PAH and other hydrophobic organic contaminants. Two point sources of PAH to the 600-m segment of the creek were differentiated. Aqueous concentrations were found to wane dramatically over the relatively short section of the creek between the point sources. All samples were almost devoid of alkyl-substituted PAH, indicating that the ultimate sources were probably of pyrogenic nature.

Polycyclic Aromatic Compounds↗

USGS1995

Dietary exposure of mink to carp from Saginaw Bay. 3. Characterization of dietary exposure to planar halogenated hydrocarbons, dioxin equivalents, and biomagnification

Mink are known to be very sensitive to the toxic effects of planar polychlorinated biphenyls (pPCBs), polychlorinated dibenzo- p -dioxins (PCDDs), and polychlorinated dibenzofurans (PCDFs), collectively known as planar halogenated hydrocarbons (PHHs). Previously, we reported the reproductive effects in mink fed a diet containing 10, 20, or 40% fish taken from Saginaw Bay, Lake Huron. The present study reports the chemical characterization of the diets and the adult mink livers, along with a comparison of an additive model of toxicity with the results of the H4IIE bioassay on these samples. The assessment of dietary or tissue-based exposure of the mink to 2,3,7,8-tetrachlorodibenzo- p -dioxin (TCDD) and related compounds revealed that TCDD equivalents of the PHH mixtures largely followed an additive model of toxicity as compared with the H4IIE bioassay. Consistent dietary and liver tissue-based threshold concentrations for reproductive toxicity in mink were determined regardless of whether PHHs were quantified as TEQs (additive toxicity) or TCDD-EQs (H4IIE bioassay). Significant reproductive effects were observed in the lowest treatment group (10% fish or 19.4 pg of H4IIE bioassay-derived TCDD-EQs/g). Consumption-normalized mink liver biomagnification factors (BMFs) were 6.4−74.2 for PCDDs, <1−75.8 for PCDFs, <1−15.9 for PCBs, and in general, increased with degree of chlorination within each class. Based on TEQs or TCDD-EQ, this study confirms that mink are among the most, if not the most, sensitive mammalian species to the reproductive toxicity of TCDD and related compounds.

Environmental Science & Technology↗

USGS1993

Application of semipermeable membrane devices (SPMDs) as passive air samplers

The semipermeable membrane device (SPMD), consisting of a neutral lipid (triolein) enclosed in polyethylene layflat tubing, is demonstrated to be a highly efficient passive air sampler. These devices readily sequester lipophilic organic contaminants from the vapor phase. Specifically, the SPMDs are shown to concentrate polychlorinated biphenyl (PCB) residues from a laboratory atmosphere in a linear manner through 28 days. Under the conditions of this study, a three device composite (1.4 g triolein) extracted PCB residues from ≈ 7 m 3 of air per day.

Chemosphere↗

USGS1992

Use of semipermeable membrane devices for in situ monitoring of polycyclic aromatic hydrocarbons in aquatic environments

A method is given for the recovery, cleanup, and analysis of polycyclic aromatic hydrocarbons (PAHs) that have been sequestered in SPMDs (semipermeable membrane devices). SPMDs are polymeric membranes enclosing lipids, and mimic the bioconcentration process of aquatic animals. SPMDs are used as passive, in situ monitors of contamination by organic pollutants of aquatic environments. The method reported here includes dialytic recovery of the PAHs, cleanup of the dialysates using size exclusion, adsorption, and argentation chromatographic modules in tandem, then analysis by gas chromatography with photoionization or mass spectrometric detection. The method is demonstrated to overcome the presence of a variety of environmental co-contaminants and other potential interferents in the dialysates. A field application is also demonstrated in which SPMDs are used to monitor PAH contamination in an urban creek. Approaches to the use of SPMD data to calculate aqueous concentrations of PAHs are discussed. The use of SPMDs in combination with the complementary, PAH-specific cleanup procedure provides a unique approach to the analysis of PAH residues in the aquatic environment.

Chemosphere↗

USGS1985

National Pesticide Monitoring Program: Residues of organochlorine chemicals in freshwater fish, 1980–81

The U.S. Fish and Wildlife Service analyzed residues of organochlorine chemicals in 315 composite samples of whole fish collected in 1980–81 from 107 stations nationwide as part of the National Pesticide Monitoring Program (NPMP). The mean concentrations of total DDT and all p,p ′-ho-mologs except p,p ′-DDT showed significant but small declines relative to mean concentrations before 1978–79. The mean concentration of p,p ′-DDT did not change. The most persistent DDT homolog ( p,p ′-DDE) continued to constitute about 70% of total DDT residues, as it did in 1974–79. DDT contamination attributable to former DDT manufacturing facilities remained evident at sites in Alabama and Arkansas, and high concentrations at one site in Hawaii suggested that input to the environment was continuing. Conversely, the data do not support the contention of others that DDT was still being used in the Southwest. Residues of polychlorinated biphenyls (PCBs) remained widespread, but a significant downward trend in total PCBs was evident, especially in areas that the NPMP has previously shown to be the most heavily contaminated. Mean concentrations of dieldrin had not changed since 1978–79, and levels remained highest in Hawaii and in the Great Lakes. Toxaphene concentrations plateaued after a period of steady increase through the 1970's, but the incidence of toxaphene continued to increase; residues were present at 88% of the stations sampled in 1980–81, including one in Alaska (most likely as a consequence of atmospheric transport). Mean chlordane concentrations were slightly lower than in 1978–79, and residues were detected at fewer stations in 1980–81 than in 1978–79. Residues of other organochlorines [ e.g. , mirex, pentachloroanisole (PCA), benzene hexachloride (BHC) isomers, endrin, heptachlor, hexachlorobenzene (HCB), Dacthal ® (DCPA) 2 , and methoxychlor] were either found at relatively few (<25%) of the stations sampled in 1980–81 or were characterized by relatively low concentrations.

Archives of Environmental Contamination and Toxico↗