Geology topics

James Dunnigan

Publications and source records attributed to James Dunnigan.

3 recordsLinked to original sources

USGS2025

Non-native prey availability and over-compensatory density dependence drive population dynamics of a native fish predator

Understanding the factors that regulate population dynamics is crucial for conserving imperiled species. Bull trout ( Salvelinus confluentus ), a piscivorous salmonid and one of North America's most threatened cold-water species, has declined significantly due to habitat loss, overfishing, invasive species, and climate change. While recovery efforts have primarily targeted these threats, the role of prey availability in influencing bull trout population dynamics under multiple stressors remains poorly understood. Using a stage-based integrated population model, we quantified the effects of non-native prey availability (kokanee; Oncorhynchus nerka ), angling pressure, climatic variation, and density-dependent processes on bull trout population dynamics in Lake Koocanusa, a transboundary reservoir and river system (United States and Canada), over a 40-year period (1980–2023). Our results show that bull trout populations are regulated by density-dependent processes, including over-compensation in sub-adult recruitment and reduced adult survival at high densities. Increased kokanee biomass and restricted harvest significantly enhanced bull trout survival and abundance, whereas reduced water availability had a limited negative effect on sub-adult production. Model simulations indicate that as kokanee biomass availability increases, the number of bull trout that can be sustainably harvested also increases. In fact, a modest annual fishery (300 individuals) can be sustained, especially under moderate to high kokanee biomass conditions. These results underscore the importance of prey availability, including non-native species, in supporting bull trout populations. Effective management of threatened apex fish predators like bull trout requires addressing the complex interplay between environmental threats, prey dynamics, and density-dependent mechanisms across all life stages.

British Columbia, Montana↗

USGS2025

Population structure and movement dynamics of Redband Trout in the Kootenai River basin

Redband Trout Oncorhynchus mykiss gairdneri is a species of high conservation concern in the Kootenai River basin, United States and Canada. However, identifying the specific mechanisms influencing Redband Trout is difficult as its life history structure is largely unknown. Using otolith microchemistry analysis, we found that 18.5% ( n = 66) of the fish sampled ( n = 329) were a product of mainstem Kootenai River spawning. The remainder were fish ( n = 264) that originated from one of 31 tributaries throughout the basin. Redband Trout were captured between 0 and 153 km from their assigned natal tributaries. Most migratory fish originated from tributaries in the uppermost portion of the study area and had migratory mothers. However, a diversity of life history types (e.g., multi-year resident, migratory) was observed in the population. Redband Trout were estimated to outmigrate from natal habitats at a variety of ages (0–3 years) and lengths (12–430 mm). Our results highlight diversity in the population structure of Redband Trout and provide information valuable to conservation efforts in the Kootenai River system. Interestingly, several tributaries identified as natal habitats of Redband Trout contain substantial obstacles originally considered barriers to upstream fish passage. In addition, some streams in the lower portion of the Kootenai River basin with degraded habitat that were not expected to contribute Redband Trout had natal assignments. These observations indicate previously unknown sources of Redband Trout and support the notion that improved fish passage in disconnected and degraded streams could increase production of Redband Trout throughout the Kootenai River basin. Restoration efforts in the mainstem that include considerations for spawning and natal habitat may also aid in conservation efforts for Redband Trout. Our research demonstrates the value of microchemistry in planning and evaluating habitat restoration to recover fishes in large rivers.

British Columbia, Idaho, Montana↗

USGS2021

Effects of a diatom ecosystem engineer (Didymosphenia geminata) on stream food webs: Implications for native fishes

Stream habitat changes affecting primary consumers often indirectly impact secondary consumers such as fishes. Blooms of the benthic algae Didymosphenia geminata (Didymo) are known to affect stream macroinvertebrates, but the potential indirect trophic impacts on fish consumers are poorly understood. In streams of the Kootenai River basin, we quantified the diet, condition, and growth rate of species of trout, char, and sculpin. In 2018, macroinvertebrate taxa composition was different between a stream with Didymo and a stream without, but trout diets, energy demand, and growth rates were similar. Trout abundance was higher in the stream with Didymo, but the amount of drifting invertebrates was higher in the stream without. In 2019, we surveyed 28 streams with a gradient of coverage. Didymo abundance was correlated only with the percentage of aquatic invertebrates in trout diets and was not related to diets of char or sculpin or condition of any species. Thus, we found no evidence for a trophic link between Didymo blooms and the condition or growth of trout, char, or sculpin in mountainous headwater streams.

Alberta, British Columbia, Idaho, Montana↗