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Daniel K. Pearson

Publications and source records attributed to Daniel K. Pearson.

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Fish assemblage composition and mapped mesohabitat features over a range of streamflows in the Middle Rio Grande, New Mexico, winter 2011-12, summer 2012

This report documents differences in the mapped spatial extents and physical characteristics of in-channel fish habitat evaluated at the mesohabitat scale during winter 2011–12 (moderate streamflow) and summer 2012 (low streamflow) at 15 sites on the Middle Rio Grande in New Mexico starting about 3 kilometers downstream from Cochiti Dam and ending about 40 kilometers upstream from Elephant Butte Reservoir. The results of mesohabitat mapping, physical characterization, and fish assemblage surveys are summarized from the data that were collected. The report also presents general comparisons of physical mesohabitat data, such as wetted area and substrate type, and biological mesohabitat data, which included fish assemblage composition, species richness, Rio Grande silvery minnow relative abundance, and Rio Grande silvery minnow catch per unit effort.

New Mexico

Physical characteristics and fish assemblage composition at site and mesohabitat scales over a range of streamflows in the Middle Rio Grande, New Mexico, winter 2011-12, summer 2012

In winter 2011&ndash;12 and summer 2012, the U.S. Geological Survey (USGS), in cooperation with the U.S. Army Corps of Engineers, Albuquerque District and the U.S. Fish and Wildlife Service New Mexico Fish and Wildlife Conservation Office in Albuquerque, New Mexico, evaluated the physical characteristics and fish assemblage composition of available mesohabitats over a range of streamflows at 15 sites on the Middle Rio Grande in New Mexico. The fish assemblage of the Middle Rio Grande includes several minnow species adapted to hydrologically variable but seasonably predictable rivers, including the Hybognathus amarus (Rio Grande silvery minnow), a federally listed endangered species. Gaining a better understanding of habitat usage by the Rio Grande silvery minnow was the impetus for studying physical characteristics and fish assemblages in the Middle Rio Grande during different streamflow conditions. Data were collected at all 15 sites during winter 2011&ndash;12 (moderate streamflow), and a subset was collected at the 13 most downstream sites in summer 2012 (low streamflow). Sites were grouped into four river reaches separated by diversion dams listed in downstream order (names of the diversion dams are followed by short names of the sites nearest each dam in parentheses, listed in downstream order): (1) Cochiti (Pe&ntilde;a Blanca), (2) Angostura (Bernalillo, La Orilla, Barelas, Los Padillas), (3) Isleta (Los Lunas I, Los Lunas II, Abeytas, La Joya, Rio Salado), and (4) San Acacia (Lemitar, Arroyo del Tajo, San Pedro, Bosque del Apache I, and Bosque del Apache II). Stream habitat was mapped in the field by using a geographic information system in conjunction with a Global Positioning System. Fish assemblage composition was determined during both streamflow regimes, and fish were collected by seining in each mesohabitat where physical characteristic data (depth, velocity, dominant substrate type and size, and percent embeddedness) and water-quality properties (temperature, dissolved oxygen, specific conductance, and pH; during summer 2012 only) were measured. Nineteen species of fish were collected among the 15 sites and four reaches over both sampling periods; 10 of these 19 species are introduced. Fish-species richness (total number of fish species collected at each site during each sampling event) among sites that were sampled during both sampling periods ranged from 6 at Rio Salado to 12 at La Orilla. Fish were most abundant at the Lemitar site (1,786 individuals) and least abundant at the San Pedro site (275 individuals). The native Cyprinella lutrensis (red shiner) was the most abundant species collected among all of the sites, accounting for about 42 percent of fish collected. Fish-species richness and catch per unit effort (CPUE) were higher (or equivalent) at all sites during summer 2012 compared to winter 2011&ndash;12. The relations between fish assemblage composition (that is, total abundance, which refers to the number of individuals of each species that were collected) and selected environmental variables (physical characteristic data collected at the mesohabitat scale [depth, velocity, and substrate particle size], and mesohabitat types) were explored by using canonical correspondence analysis. Environmental variables explained 8 percent (p=0.48) of the variability in the Middle Rio Grande fish assemblage during winter 2011&ndash;12, and Rio Grande silvery minnow were weakly associated with sand substrates, relatively moderate velocities (qualitative descriptors are derived from synthetic gradients extracted from CCAs), and relatively shallow depths. Environmental variables explained 14 percent (p < 0.01) of the variability in the Middle Rio Grande fish assemblage during summer 2012, when Rio Grande silvery minnow were associated with run mesohabitats, relatively high velocities, sand substrates, and relatively moderate depths. The mean fish-species richness was greater in summer 2012 than in winter 2011&ndash;12 for each mesohabitat type, and the overall fish-species richness across all mesohabitat types was 0.62 during winter 2011&ndash;12, compared to 1.49 during summer 2012. The highest mean CPUE during winter 2011&ndash;12 was in isolated pools (54.3 fish per 100 square meters [m 2 ]), whereas the lowest was in flats (18.9 fish per 100 m 2 ). Ranges in CPUE were higher in summer 2012 relative to winter 2011&ndash;12 in each mesohabitat type sampled. As in winter 2011&ndash;12, the highest mean CPUE during summer 2012 was in isolated pools (233 fish per 100 m 2 ), whereas the lowest was in flats (29.6 fish per 100 m 2 ). Overall mean CPUE per mesohabitat across all mesohabitat types was 29.1 fish per 100 m 2 during winter 2011&ndash;12 compared to 85.3 fish per 100 m 2 during summer 2012. Four species of minnows (red shiner, Rio Grande silvery minnow, Pimephales promelas [fathead minnow], and Platygobio gracilis [flathead chub]) were selected to compare preferred mesohabitat characteristics because all are small-bodied minnows and because more than 200 individuals of each of these species were collected. Red shiner were collected across the largest range of depths in both winter 2011&ndash;12 (0.02&ndash;4.31 feet [ft]) and summer 2012 (0.05&ndash;3.4 ft), as well as the largest range of velocities (0.0&ndash;4.31 feet per second [ft/s]) during winter 2011&ndash;12 among the four minnow species of interest. Rio Grande silvery minnow occurred in the narrowest range of depths (0.30&ndash;2.1 ft) during summer 2012, as well as the narrowest range of velocities in both winter 2011&ndash;12 (0.0&ndash;3.18 ft/s) and summer 2012 (0.02&ndash;1.51 ft/s). Water-quality properties were only collected during summer 2012, when low-streamflow conditions existed and water-quality properties were thought to be potentially most limiting to aquatic life. Area-weighted mean water temperatures tended to be higher at the sites that were sampled in August 2012 (25.57 degrees Celsius [&deg;C]) compared to June 2012 (24.61 &deg;C). The highest area-weighted mean water temperature at a given site (29.03 &deg;C) was measured at the Lemitar site on August 7, 2012, coincident with the lowest measured discharge (4.13 cubic feet per second [ft 3 /s]). Area-weighted mean dissolved oxygen concentrations tended to be lower in August (7.46 milligrams per liter [mg/L]) compared to June (8.33 mg/L). The highest area-weighted mean dissolved oxygen concentration (9.13 mg/L) was measured at the Lemitar site on August 7, 2012, and the lowest area-weighted mean dissolved oxygen concentration (6.23 mg/L) was measured at the Los Padillas site on August 10, 2012. Area-weighted specific conductance in the sites upstream from La Joya did not exceed 400 microsiemens per centimeter (&mu;S/cm) at 25 &deg;C, whereas the area-weighted mean specific conductance at La Joya (837 &mu;s/cm at 25 &deg;C), Rio Salado (857 &mu;s/cm at 25 &deg;C), and Lemitar (1,300 &mu;s/cm at 25 &deg;C) were all well above the average of the area-weighted means for the 10 remaining sites (433 &mu;s/cm at 25 &deg;C). Lower area-weighted mean pH values were measured at the 3 sites in and near Albuquerque (La Orilla, Barelas, and Los Padillas&mdash;7.98, 8.08, and 7.81, respectively) compared to any of the 10 remaining sites, which had an overall mean pH of 8.44.

New Mexico

Mesohabitats, fish assemblage composition, and mesohabitat use of the Rio Grande silvery minnow over a range of seasonal flow regimes in the Rio Grande/Rio Bravo del Norte, in and near Big Bend National Park, Texas, 2010-11

In 2010&ndash;11, the U.S. Geological Survey (USGS), in cooperation with the U.S. Fish and Wildlife Service, evaluated the physical characteristics and fish assemblage composition of mapped river mesohabitats at four sites on the Rio Grande/Rio Bravo del Norte (hereinafter Rio Grande) in and near Big Bend National Park, Texas. The four sites used for the river habitat study were colocated with sites where the U.S. Fish and Wildlife Service has implemented an experimental reintroduction of the Rio Grande silvery minnow (Hybognathus amarus), a federally listed endangered species, into part of the historical range of this species. The four sites from upstream to downstream are USGS station 08374340 Rio Grande at Contrabando Canyon near Lajitas, Tex. (hereinafter the Contrabando site), USGS station 290956103363600 Rio Grande at Santa Elena Canyon, Big Bend National Park, Tex. (hereinafter the Santa Elena site), USGS station 291046102573900 Rio Grande near Ranger Station at Rio Grande Village, Tex. (hereinafter the Rio Grande Village site), and USGS station 292354102491100 Rio Grande above Stillwell Crossing near Big Bend National Park, Tex. (hereinafter the Stillwell Crossing site). In-channel river habitat was mapped at the mesohabitat scale over a range of seasonal streamflows. A late summer (August&ndash;September 2010) high-flow regime, an early spring (April&ndash;May 2010) intermediate flow regime, and a late spring (May 2011) low-flow regime were the seasonal flows used in the study. River habitat was mapped in the field by using a geographic information system and a Global Positioning System unit to characterize the sites at the mesohabitat scale. Physical characteristics of a subset of mesohabitats in a reach of the Rio Grande at each site were measured during each flow regime and included depth, velocity, type and size of the substrate, and percent embeddedness. Selected water-quality properties (dissolved oxygen, pH, specific conductance, and temperature) of a subset of mesohabitats were also measured. The fish assemblage composition at the four sites was determined during the three flow regimes, and fish were collected by seining in each mesohabitat where physical characteristic data were measured, except during some periods of high flow when electrofishing was done to supplement seining. The total number and number of types of mesohabitats were larger during low flows compared to intermediate flows, and larger during intermediate flows compared to high flows. Decreases in streamflow typically led to increases in channel complexity in terms of the number of different types and total number of mesohabitats present. The total wetted area increased and the number of mesohabitat types generally decreased as streamflow increased. At all four sites, the smallest depths and velocities were generally measured during low flow and the largest depths and velocities at high flow. Specific conductance was relatively consistent between the Contrabando and Santa Elena sites, the two most upstream sites. Specific conductance decreased appreciably between the Santa Elena site and the Rio Grande Village, and decreased slightly between the Rio Grande Village site and the Stillwell Crossing site. Specific-conductance values within and among mesohabitat types at a given site were relatively consistent. The pH values measured within and among mesohabitat types also were relatively consistent at all four sites. Median dissolved oxygen concentrations were relatively consistent between the Contrabando and Santa Elena sites (8.34 and 8.54 milligrams per liter [mg/L], respectively) but decreased along the stretch of river between the Santa Elena and Rio Grande Village sites to 7.31 mg/L, possibly because of small dissolved oxygen concentrations associated with contributions from springs between the Santa Elena and Rio Grande Village sites. Dissolved oxygen concentrations increased substantially between the Rio Grande Village and Stillwell Crossing sites to 10.06 mg/L. Mesohabitat water temperatures were generally highest in mesohabitats commonly associated with shallow water depths and low velocities (forewaters, backwaters, and embayments). Of the 21 species of fish collected during the three flow regimes, red shiner ( Cyprinella lutrensis ) was the most abundant species overall, accounting for about 35 percent of all fish collected. Another minnow, the endemic Tamaulipas shiner ( Notropis braytoni ), was second in overall abundance. A nonnative species, the common carp ( Cyprinus carpio ), was the third most abundant species overall. No statistically significant differences in fish-species richness were found among the different mesohabitat types. Median fish-species richness and maximum fish-species richness values were larger, and fish-species richness was more variable in runs, pools, forewaters, and backwaters during low flow compared to the fish-species richness values calculated for intermediate and high flows. Fish density in backwater mesohabitats was significantly different from fish densities in run mesohabitats, but fish densities were not significantly different among the other mesohabitat types. Of the 39 Rio Grande silvery minnow individuals collected at the four study sites, 21 (more than half) were collected at the Santa Elena site, 12 at the Contrabando site, and 3 each at the Rio Grande Village and Stillwell Crossing sites. Rio Grande silvery minnow fish-species densities followed the same order as abundance of this species at the sites; fish-species densities ranged from 0.95 fish per 100 square meters (m 2 ) at the Santa Elena site to 0.11&ndash;0.47 fish per 100 m 2 at the other three sites. The Rio Grande silvery minnow was most common in pools and runs during low- and intermediate-flow regimes. This species was less commonly collected in backwaters, embayments, and rapids, and none were collected in forewaters or submerged channel bars. The Tamaulipas shiner has similar life-history characteristics compared to the Rio Grande silvery minnow, including similar feeding habits and habitat use. Tamaulipas shiner was most common in backwater, run, and riffle mesohabitats (in decreasing order) during low and intermediate flow and was less common in submerged channel bar, pool, forewater, rapid, and embayment mesohabitats (in decreasing order) during the same flows. The overall relative percent density (composite of all three flow regimes) of Rio Grande silvery minnow was largest in rapid and pool mesohabitats and for Tamaulipas shiner was largest in backwater mesohabitats. There were no statistically significant differences between the stream velocities associated with seine hauls of the Rio Grande silvery minnow and Tamaulipas shiner. Stream velocities associated with the seine hauls that included Rio Grande silvery minnow indicate that this species is predominantly found in low-velocity mesohabitats. Velocities associated with seine hauls that included the Tamaulipas shiner represented a much broader overall range of velocities than those associated with Rio Grande silvery minnow collections. No statistically significant differences were found between the depths for seine hauls that included Rio Grande silvery minnow or Tamaulipas shiner. The Rio Grande silvery minnow was more commonly collected in seine hauls from mesohabitats dominated by cobble substrates and less frequently collected in mesohabitats with substrates dominated by fine-sized silt and clay particles, gravels, and sands, in that order. In contrast, the Tamaulipas shiner was broadly distributed among mesohabitats characterized as having gravel, cobble, and silt and clay.

Texas

A conceptual hydrogeologic model for the hydrogeologic framework, geochemistry, and groundwater-flow system of the Edwards-Trinity and related aquifers in the Pecos County region, Texas

The Edwards-Trinity aquifer is a vital groundwater resource for agricultural, industrial, and municipal uses in the Trans-Pecos region of west Texas. A conceptual model of the hydrogeologic framework, geochemistry, and groundwater-flow system in the 4,700 square-mile study area was developed by the U.S. Geological Survey (USGS) in cooperation with the Middle Pecos Groundwater Conservation District, Pecos County, City of Fort Stockton, Brewster County, and Pecos County Water Control and Improvement District No. 1. The model was developed to gain a better understanding of the groundwater system and to establish a scientific foundation for resource-management decisions. Data and information were collected or obtained from various sources to develop the model. Lithologic information obtained from well reports and geophysical data were used to describe the hydrostratigraphy and structural features of the groundwater system, and aquifer-test data were used to estimate aquifer hydraulic properties. Groundwater-quality data were used to evaluate groundwater-flow paths, water and rock interaction, aquifer interaction, and the mixing of water from different sources. Groundwater-level data also were used to evaluate aquifer interaction as well as to develop a potentiometric-surface map, delineate regional groundwater divides, and describe regional groundwater-flow paths. Several previous studies have been done to compile or collect physical and chemical data, describe the hydrogeologic processes, and develop conceptual and numerical groundwater-flow models of the Edwards-Trinity aquifer in the Trans-Pecos region. Documented methods were used to compile and collect groundwater, surface-water, geochemical, geophysical, and geologic information that subsequently were used to develop this conceptual model.

Texas

Estimates of the volume of water in five coal aquifers, Northern Cheyenne Indian Reservation, southeastern Montana

The Tongue River Member of the Tertiary Fort Union Formation is the primary source of groundwater in the Northern Cheyenne Indian Reservation in southeastern Montana. Coal beds within this formation generally contain the most laterally extensive aquifers in much of the reservation. The U.S. Geological Survey, in cooperation with the Northern Cheyenne Tribe, conducted a study to estimate the volume of water in five coal aquifers. This report presents estimates of the volume of water in five coal aquifers in the eastern and southern parts of the Northern Cheyenne Indian Reservation: the Canyon, Wall, Pawnee, Knobloch, and Flowers-Goodale coal beds in the Tongue River Member of the Tertiary Fort Union Formation. Only conservative estimates of the volume of water in these coal aquifers are presented. The volume of water in the Canyon coal was estimated to range from about 10,400 acre-feet (75 percent saturated) to 3,450 acre-feet (25 percent saturated). The volume of water in the Wall coal was estimated to range from about 14,200 acre-feet (100 percent saturated) to 3,560 acre-feet (25 percent saturated). The volume of water in the Pawnee coal was estimated to range from about 9,440 acre-feet (100 percent saturated) to 2,360 acre-feet (25 percent saturated). The volume of water in the Knobloch coal was estimated to range from about 38,700 acre-feet (100 percent saturated) to 9,680 acre-feet (25 percent saturated). The volume of water in the Flowers-Goodale coal was estimated to be about 35,800 acre-feet (100 percent saturated). Sufficient data are needed to accurately characterize coal-bed horizontal and vertical variability, which is highly complex both locally and regionally. Where data points are widely spaced, the reliability of estimates of the volume of coal beds is decreased. Additionally, reliable estimates of the volume of water in coal aquifers depend heavily on data about water levels and data about coal-aquifer characteristics. Because the data needed to define the volume of water were sparse, only conservative estimates of the volume of water in the five coal aquifers are presented in this report. These estimates need to be used with caution and mindfulness of the uncertainty associated with them.

Montana

Data collection and compilation for a geodatabase of groundwater, surface-water, water-quality, geophysical, and geologic data, Pecos County Region, Texas, 1930-2011

The U.S. Geological Survey, in cooperation with Middle Pecos Groundwater Conservation District, Pecos County, City of Fort Stockton, Brewster County, and Pecos County Water Control and Improvement District No. 1, compiled groundwater, surface-water, water-quality, geophysical, and geologic data for site locations in the Pecos County region, Texas, and developed a geodatabase to facilitate use of this information. Data were compiled for an approximately 4,700 square mile area of the Pecos County region, Texas. The geodatabase contains data from 8,242 sampling locations; it was designed to organize and store field-collected geochemical and geophysical data, as well as digital database resources from the U.S. Geological Survey, Middle Pecos Groundwater Conservation District, Texas Water Development Board, Texas Commission on Environmental Quality,and numerous other State and local databases. The geodatabase combines these disparate database resources into a simple data model. Site locations are geospatially enabled and stored in a geodatabase feature class for cartographic visualization and spatial analysis within a Geographic Information System. The sampling locations are related to hydrogeologic information through the use of geodatabase relationship classes. The geodatabase relationship classes provide the ability to perform complex spatial and data-driven queries to explore data stored in the geodatabase.

Texas

Land-Cover and Imperviousness Data for Regional Areas near Denver, Colorado; Dallas-Fort Worth, Texas; and Milwaukee-Green Bay, Wisconsin - 2001

This report describes the processing and results of land-cover and impervious surface derivation for parts of three metropolitan areas being studied as part of the U.S. Geological Survey's (USGS) National Water-Quality Assessment (NAWQA) Program Effects of Urbanization on Stream Ecosystems (EUSE). The data were derived primarily from Landsat-7 Enhanced Thematic Mapper Plus (ETM+) satellite imagery from the period 1999-2002, and are provided as 30-meter resolution raster datasets. Data were produced to a standard consistent with data being produced as part of the USGS National Land Cover Database 2001 (NLCD01) Program, and were derived in cooperation with, and assistance from, NLCD01 personnel. The data were intended as surrogates for NLCD01 data because of the EUSE Program's time-critical need for updated land-cover for parts of the United States that would not be available in time from the NLCD01 Program. Six datasets are described in this report: separate land-cover (15-class categorical data) and imperviousness (0-100 percent continuous data) raster datasets for parts of the general Denver, Colorado area (South Platte River Basin), Dallas-Fort Worth, Texas area (Trinity River Basin), and Milwaukee-Green Bay, Wisconsin area (Western Lake Michigan Drainages).

Data Series