Geology topics

Christopher T. Rota

Publications and source records attributed to Christopher T. Rota.

6 recordsLinked to original sources

USGS2024

White-tailed deer detection rates increase when coyotes are present

Predator species can indirectly affect prey species through the cost of anti-predator behavior responses, which may involve shifts in occupancy, space use, or movement. Quantifying the various strategies implemented by prey species to avoid adverse interactions with predators can lead to a better understanding of potential population-level repercussions. Therefore, the purpose of this study was to examine predator–prey interactions by quantifying the effect of predator species presence on detection rates of prey species, using coyotes ( Canis latrans ) and white-tailed deer ( Odocoileus virginianus ) in Central Appalachian forests of the eastern United States as a model predator–prey system. To test two competing hypotheses related to interspecific interactions, we modeled species detections from 319 camera traps with a two-species occupancy model that incorporated a continuous-time detection process. We found that white-tailed deer occupancy was independent of coyote occupancy, but white-tailed deer were more frequently detectable and had greater detection intensity at sites where coyotes were present, regardless of vegetation-related covariates. In addition, white-tailed deer detection rates at sites with coyotes were highest when presumed forage availability was relatively low. These findings suggest that white-tailed deer may be exhibiting an active avoidance behavioral response to predators by increasing movement rates when coyotes are present in an area, perhaps due to reactive evasive maneuvers and/or proactive attempts to reduce adverse encounters with them. Concurrently, coyotes could be occupying sites with higher white-tailed deer densities. Because white-tailed deer did not exhibit significant shifts in daily activity patterns based on coyote occupancy, we further suggest that white-tailed deer in our study system generally do not use temporal partitioning as their primary strategy for avoiding encounters with coyotes. Overall, our study implements a recently developed analytical approach for modeling multi-species occupancy from camera traps and provides novel ecological insight into the complex relationships between predator and prey species.

Pennsylvania, West Virginia↗

USGS2022

Habitat management for stopover and breeding songbird communities along rights-of-way in forest-dominated landscapes

The proliferation of energy rights-of-way (pipelines and powerlines; ROWs) in the central Appalachian region has prompted wildlife management agencies to consider ways to use these features to manage and conserve at-risk songbird species. However, little empirical evidence exists regarding best management strategies to enhance habitat surrounding ROWs for the songbird community during stopover or breeding periods. We used a before-after-control-impact design to study cut-back border (linear tree cuttings along abrupt forest edges) harvest width (15 m, 30 m, and 45 m wide into the forest) and harvest intensity (14 m 2 /ha and 4.5 m 2 /ha basal area retention) prescriptions along ROWs and assessed their effects on mature forest and young forest songbird species and avian guilds (forest gap habitat, forest interior habitat, young forest habitat, and species of regional conservation priority) up to two years after treatment throughout West Virginia. Species richness during the spring stopover period initially decreased at one-year post-treatment but returned to pre-treatment levels by two-year post-treatment. Breeding season responses to cut-back border treatments varied across harvest width, harvest intensity, and time, but all responses of focal species abundance and guild richness were neutral or positive. Cut-back border harvest intensity had a stronger influence (i.e., more positive responses) than harvest width on breeding focal species abundances and guild richness. For harvest intensity, the more intense, 4.5 m 2 /ha retention treatment had a stronger influence (i.e., more positive responses) than the less intense, 14 m 2 /ha retention treatment. For harvest width, the narrowest treatment (15-m wide) had the strongest influence (i.e., more positive responses) of all width treatments, followed by the widest (45-m wide treatment) with the least influence from the 30-m wide treatment. Abundances and richness increased from pre-treatment to two-year post-treatment across all species and guilds that exhibited a response. These results suggest that cut-back borders increase breeding season habitat suitability along ROWs for the mature forest and young forest songbird community as well as for species of regional conservation priority in the short-term. These findings can aid development of management guidelines for the forest songbird community along abrupt forest edges of man-made habitat features in forest-dominated landscapes.

West Virginia↗

USGS2022

Understory structure and heterospecifics influence the occupancy of a ground-nesting species of conservation concern, the Canada Warbler

Forest structure and composition in eastern U.S. forests are changing because of forest regeneration after farmland abandonment, less frequent occurrence of severe disturbances, and climate change. Some of these changes may disproportionally affect birds that rely on gap dynamics or other forest canopy disturbances to create understory habitat. The Canada Warbler ( Cardellina canadensis ) is one such understory specialist that has undergone consistent declines. We assessed environmental and interspecific factors associated with Canada Warbler space use in its southern breeding distribution to understand potential causes of population declines and inform conservation efforts. We evaluated Canada Warbler occupancy from 840 point count surveys conducted in 2017 and 2018 at 470 unique locations (79% of locations surveyed in both years) throughout Monongahela National Forest, West Virginia, USA. We modeled Canada Warbler occupancy probability as a function of environmental variables and included Black-throated Blue Warbler ( Setophaga caerulescens ) and Hermit Thrush ( Catharus guttatus ) as interacting species because all three species exhibit similar habitat preferences. Canada Warblers were most likely to occur in areas with rhododendron ( Rhododendron maximum ) density > 0.27 stems/m² and within 3 m of riparian areas (streams and wetlands). They were also more likely to occur in mid-elevation (highest occupancy at 930 m) northern hardwood forests when Black-throated Blue Warblers were also present. Black-throated Blue Warblers were most likely to occupy mid-elevation sites with high shrub density, whereas Hermit Thrushes were more likely to occupy high-elevation, old-age forests. Potential management actions could focus on conserving riparian areas in northern hardwood forests, especially those with dense rhododendron thickets. Such potential actions could also be beneficial across the entire elevation range we explored within the region (500–1300 m). Canada Warblers may be benefiting from the recent spread of rhododendron habitats and northern hardwood forest types within West Virginia.

West Virginia↗

USGS2019

An improved mechanical owl for efficient capture of nesting raptors

Scientific study of raptors often requires the use of a lure to capture individuals for marking or collecting various data and samples. Live lure owls in the genus Bubo are commonly used with mist nets or dho-gazas to trap nesting raptors, but the use of these live lures presents ethical, logistical, and financial challenges. Although owls mounted by taxidermists and mechanical owls have been used in place of a live bird, the success of these types of lures varies widely. We created a more realistic mechanical owl with a greater range of motion than previous models, and then tested the owl on six raptor species in a variety of habitats. For all but one species, capture rates using our mechanical owl were similar to or slightly higher than those reported in studies using live lure owls or previously designed mechanical owls. Time to capture of Northern Goshawks ( Accipiter gentilis ) was, on average, 8 min faster when using our mechanical owl compared to a live owl. Cost analysis revealed that both the initial expense and long-term maintenance of a mechanical owl were less than that of a live lure owl. Mechanical owls can be a useful tool for capturing raptors. Although there are some drawbacks to using a mechanical owl, our results suggest that mechanical birds are comparable to live lure owls and we believe the benefits of using a mechanical owl often outweigh the costs.

Journal of Raptor Research↗

USGS2016

Seeing the forest through the trees: Considering roost-site selection at multiple spatial scales

Conservation of bat species is one of the most daunting wildlife conservation challenges in North America, requiring detailed knowledge about their ecology to guide conservation efforts. Outside of the hibernating season, bats in temperate forest environments spend their diurnal time in day-roosts. In addition to simple shelter, summer roost availability is as critical as maternity sites and maintaining social group contact. To date, a major focus of bat conservation has concentrated on conserving individual roost sites, with comparatively less focus on the role that broader habitat conditions contribute towards roost-site selection. We evaluated roost-site selection by a northern population of federally-endangered Indiana bats ( Myotis sodalis ) at Fort Drum Military Installation in New York, USA at three different spatial scales: landscape, forest stand, and individual tree level. During 2007–2011, we radiotracked 33 Indiana bats (10 males, 23 females) and located 348 roosting events in 116 unique roost trees. At the landscape scale, bat roost-site selection was positively associated with northern mixed forest, increased slope, and greater distance from human development. At the stand scale, we observed subtle differences in roost site selection based on sex and season, but roost selection was generally positively associated with larger stands with a higher basal area, larger tree diameter, and a greater sugar maple ( Acer saccharum ) component. We observed no distinct trends of roosts being near high-quality foraging areas of water and forest edges. At the tree scale, roosts were typically in American elm ( Ulmus americana ) or sugar maple of large diameter (>30 cm) of moderate decay with loose bark. Collectively, our results highlight the importance of considering day roost needs simultaneously across multiple spatial scales. Size and decay class of individual roosts are key ecological attributes for the Indiana bat, however, larger-scale stand structural components that are products of past and current land use interacting with environmental aspects such as landform also are important factors influencing roost-tree selection patterns.

PLoS ONE↗

USGS2009

Occupancy estimation and the closure assumption

1. Recent advances in occupancy estimation that adjust for imperfect detection have provided substantial improvements over traditional approaches and are receiving considerable use in applied ecology. To estimate and adjust for detectability, occupancy modelling requires multiple surveys at a site and requires the assumption of 'closure' between surveys, i.e. no changes in occupancy between surveys. Violations of this assumption could bias parameter estimates; however, little work has assessed model sensitivity to violations of this assumption or how commonly such violations occur in nature. 2. We apply a modelling procedure that can test for closure to two avian point-count data sets in Montana and New Hampshire, USA, that exemplify time-scales at which closure is often assumed. These data sets illustrate different sampling designs that allow testing for closure but are currently rarely employed in field investigations. Using a simulation study, we then evaluate the sensitivity of parameter estimates to changes in site occupancy and evaluate a power analysis developed for sampling designs that is aimed at limiting the likelihood of closure. 3. Application of our approach to point-count data indicates that habitats may frequently be open to changes in site occupancy at time-scales typical of many occupancy investigations, with 71% and 100% of species investigated in Montana and New Hampshire respectively, showing violation of closure across time periods of 3 weeks and 8 days respectively. 4. Simulations suggest that models assuming closure are sensitive to changes in occupancy. Power analyses further suggest that the modelling procedure we apply can effectively test for closure. 5. Synthesis and applications. Our demonstration that sites may be open to changes in site occupancy over time-scales typical of many occupancy investigations, combined with the sensitivity of models to violations of the closure assumption, highlights the importance of properly addressing the closure assumption in both sampling designs and analysis. Furthermore, inappropriately applying closed models could have negative consequences when monitoring rare or declining species for conservation and management decisions, because violations of closure typically lead to overestimates of the probability of occurrence.

Montana;New Hampshire↗