Geology topics

Carl R. Callahan

Publications and source records attributed to Carl R. Callahan.

12 recordsLinked to original sources

USGS2025

Highly pathogenic avian influenza virus H5N1 in double-crested cormorants (Nannopterum auritum) of the Chesapeake Bay, USA

Double-crested Cormorants ( Nannopterum auritum ) have historically exhibited low levels of infection and antibodies to avian influenza virus (AIV). The recent global expansion of clade 2.3.4.4b A/goose/Guangdong/1/1996 highly pathogenic (HP) avian influenza virus H5N1 (HPAI H5N1) has resulted in large-scale mortalities across diverse waterbird taxa including cormorants. We sampled 32 and 29 Double-crested Cormorants breeding in the Chesapeake Bay, US, during the summers of 2023 and 2024, respectively, to assess HPAI H5N1 infection and AIV antibodies. Although no mortality was observed in the area, one bird sampled in 2023 was infected with HPAI H5N1. Additionally, 21/31 individuals in 2023 and 10/25 individuals in 2024 for which sera were collected had AIV antibodies. Based on additional testing using hemagglutination inhibition, virus neutralization, and an enzyme-linked lectin assay, 94 and 100% (2023 and 2024, respectively) of the seropositive birds tested positive for antibodies to both H5 and N1, suggesting previous infection with HPAI H5N1. These results are consistent with survival and limited clinical effects related to HPAI H5N1 infections. Furthermore, these results suggest that population immunity to HPAI H5N1 within the Chesapeake Bay might reduce future infections and potential population impacts should HP H5N1 remain on the landscape, though immunity may be waning across time. Because results are based on a single population, additional testing for both infection and antibodies as well as continued monitoring could enhance understanding of antibody persistence.

Maryland, Virginia↗

USGS2024

Dust management at an active construction area impacts monarch distribution

The North American population of monarch butterflies ( Danaus plexippus) is experiencing dramatic declines, necessitating investigations into challenges facing this species that can be resolved through management actions. For instance, dust made airborne by heavy equipment driving along a dirt road can settle on roadside vegetation, resulting in reduced use by monarchs. Dust accumulation on areas where floral nectaries such as leaves, stems, and flowers may be present could reduce the ability of pollinators, such as monarchs, to access nectar from flowering plants needed during migration. One such challenge was observed on Poplar Island, an island restoration project located in the Maryland portion of the Chesapeake Bay, USA. To determine if road watering would result in notable reductions of dust accumulation on adjacent roadside vegetation, and if such a reduction in dust would affect monarch use of treated habitat, water was applied via spraying to sections of the roadway during the 2022 fall migration period. Treatment areas where water was applied to the road were found to have significant reductions in dust accumulation ( P ≤0.001) as well as significantly higher use by monarchs ( P = 0.002), relative to non-watered control areas. While these results indicate potential utility of road watering to support monarchs at sites with high dust accumulation, numerous additional elements such as water usage and logistical constraints must also be considered. While limited in scope, these data do provide a notable proof-of-concept for managing this issue at other sites and can be built upon with further research.

Maryland↗

USGS2023

Usurpation and brooding of Least Tern (Sternula antillarum) chicks by Common Terns (Sterna hirundo)

While nest usurpation and subsequent incubation of eggs and even brooding of chicks from other species has been reported for Common Terns ( Sterna hirundo ), such behavior is considered rare. We report an observation of a Common Tern pair usurping the Least Tern ( Sternula antillarum ) nest and brooding the Least Tern chicks. While the Least Tern pair attempted to provide care for the chicks, the Common Terns displayed aggressive behavior and defended the nest. Though both species attempted to feed the chicks, no feeding events were observed due to harassment from the other species. Neither pair was observed nesting prior to or following this event, and all chicks are believed to have been lost to predation. We discuss the possible scenarios leading to the observed usurpation event, the possibility that usurpations are more common than previously believed, and the need for different monitoring methods to elucidate the causes of usurpations.

Diversity↗

USGS2023

A comparison of direct & indirect survey methods for estimating colonial nesting waterbird populations

Population estimates derived from monitoring efforts can be sensitive to the survey method selected, potentially leading to biased estimates and low precision relative to true population size. While small unmanned aerial systems (UAS) present a unique opportunity to survey avian populations while limiting disturbance, relatively little is known about how this method compares with more traditional approaches. In this study we compared population estimates of Snowy ( Egretta thula ) and Cattle Egrets ( Bubulcus ibis ) in a mixed-species colony in the Chesapeake Bay (Maryland, USA) derived from UAS photo counts, flush counts, flight-line surveys, and in-colony nest counts along with the time required to derive an estimate via each approach. We found that UAS counts and flush counts produced lower pair estimates than nest counts and flight-line surveys ( P < 0.05), and required dramatically less time (x̄ = 6, 8, 84 and 90 min, respectively). These results suggest that while UAS have the potential to collect valuable survey data from breeding colonies that are hard to reach or are especially sensitive to the disturbance inherent in other methods, inherent biases should be considered and caution should be used when comparing results between survey types.

Maryland↗

USGS2022

Maintenance and dissemination of avian-origin influenza A virus within the northern Atlantic Flyway of North America

Wild waterbirds, the natural reservoirs for avian influenza viruses, undergo migratory movements each year, connecting breeding and wintering grounds within broad corridors known as flyways. In a continental or global view, the study of virus movements within and across flyways is important to understanding virus diversity, evolution, and movement. From 2015 to 2017, we sampled waterfowl from breeding (Maine) and wintering (Maryland) areas within the Atlantic Flyway (AF) along the east coast of North America to investigate the spatio-temporal trends in persistence and spread of influenza A viruses (IAV). We isolated 109 IAVs from 1,821 cloacal / oropharyngeal samples targeting mallards (Anas platyrhynchos) and American black ducks (Anas rubripes) , two species having ecological and conservation importance in the flyway that are also host reservoirs of IAV. Isolates with >99% nucleotide similarity at all gene segments were found between eight pairs of birds in the northern site across years, indicating some degree of stability among genome constellations and the possibility of environmental persistence. No movement of whole genome constellations were identified between the two parts of the flyway, however, virus gene flow between the northern and southern study locations was evident. Examination of banding records indicate direct migratory waterfowl movements between the two locations within an annual season, providing a mechanism for the inferred viral gene flow. Bayesian phylogenetic analyses provided evidence for virus dissemination from other North American wild birds to AF dabbling ducks (Anatinae), shorebirds (Charidriformes), and poultry (Galliformes). Evidence was found for virus dissemination from shorebirds to gulls (Laridae), and dabbling ducks to shorebirds and poultry. The findings from this study contribute to the understanding of IAV ecology in waterfowl within the AF.

Chesapeake Bay↗

USGS2022

Poplar Island: Understanding the development of a beneficial use restoration site

Poplar Island, like many other islands throughout the Chesapeake Bay, eroded from 460 hectares in 1847 to only 1.5 hectares by the 1990’s. However, the U.S. Army Corps of Engineers, Maryland Department of Transportation, and numerous other state and federal agencies selected this site as the location of a beneficial use project aimed at restoring remote island habitat in the Chesapeake Bay using clean dredge material. While monitoring efforts since the beginning of restoration efforts have documented extensive use of Poplar Island by numerous species across multiple taxa, these efforts have previously lacked context regarding underlying habitat patterns. However, such information is especially important on a site like Poplar Island where habitat distribution and availability can change dramatically between years due to ongoing construction efforts. To address this information gap we digitized annual aerial imagery of Poplar Island from 2006-2017 into 20 habitat classes. The resulting data layers demonstrate the transition of cells along the eastern side of the island from undeveloped cells to planted marsh cells, which matches trends seen in avian monitoring data. Similarly, our data display changes in the distribution of specific resources such as sand across the island, and how individual locations of interest such as constructed habitat islands have evolved over time. We believe that these data will provide critical insight into the factors influencing wildlife distribution patterns on Poplar Island, and will allow for the identification of management actions that may either be targeted or avoided in the planning of future beneficial use projects.

Maryland↗

USGS2020

Using thermal infrared cameras to detect avian chicks at various distances and vegetative coverages

Population monitoring of nesting waterbirds often involves frequent entries into the colony, but alternative methods such as local remotely sensed thermal imaging may help reduce disturbance while providing a cost-effective way to survey breeding populations. Such an approach can have high initial costs, however, which may have reduced the number of studies investigating functionality of paired thermal infrared camera and small unmanned aerial systems. Here, we take the first step of exploring the ability of two thermal infrared cameras to detect an avian chick under varying vegetative cover and distances, preceding field-mounting applications on a small unmanned aerial system. We created seven “bioboxes” to simulate a range of natural vegetation types and densities for a globally important colonial ground-nesting waterbird species, the common tern Sterna hirundo . We placed a juvenile chicken Gallus gallus (surrogate for the locally endangered common tern) in each box, and we tested two market-accessible infrared cameras (produced by FLIR Systems and Infrared Cameras, Inc.) at five elevations using a stationary boom (maximum height = 12 m). We applied computer-based digital thresholding to collected images, identifying pixels meeting one of seven threshold values. The chick was visible from at least one threshold value in 19 and 31 of 35 processed by the FLIR Systems and Infrared Cameras, respectively. Percentage of the chick identified across thresholds was generally highest at lower threshold values and elevations and decreased as elevation and threshold increased; however, the relative importance of each variable changed dramatically across bioboxes and camera types. Ability to detect a chick from processed images generally decreased with increasing elevation, and although we made no quantitative comparisons among boxes, detectability appeared greatest in images from both cameras when little or no vegetation was present. Interestingly, no single threshold value was best for all bioboxes. We observed notable differences between cameras including visual resolution of detected temperature differentials and image processing speed. Results of this controlled study show promise for the use of thermal infrared systems for detecting cryptic species in vegetation. Future research should work to combine thermal infrared and visual sensors with small unmanned aerial systems to test applicability in a mobile field application.

Journal of Fish and Wildlife Management↗

USGS2019

Eviction notice: Observation of a Common Tern (Sterna hirundo) usurping an active Least Tern (Sternula antillarum) Nest

Although nest usurpation is common in some species and orders of birds, usurpation has rarely been reported for Sterninae. We observed a Sterna hirundo (Common Tern) egg in an active Sternula antillarum (Least Tern) nest with a complete clutch in a mixed-species Sterninae colony in Chesapeake Bay, MD, in May 2018. Based on observations from a game camera following usurpation, Common Terns incubated the mixed-species clutch, with no further parental care provided by the usurped Least Tern. The clutch never hatched, as the Common Terns abandoned the nest prior to the hatching. While we suspect that Common Terns usurped the Least Tern nest, alternative scenarios may explain how the Common Tern egg was documented in a Least Tern nest.

Maryland↗

USGS2018

A video surveillance system to monitor breeding colonies of common terns (Sterna Hirundo)

Many waterbird populations have faced declines over the last century, including the common tern ( Sterna hirundo ), a waterbird species with a widespread breeding distribution, that has been recently listed as endangered in some habitats of its range. Waterbird monitoring programs exist to track populations through time; however, some of the more intensive approaches require entering colonies and can be disruptive to nesting populations. This paper describes a protocol that utilizes a minimally invasive surveillance system to continuously monitor common tern nesting behavior in typical ground-nesting colonies. The video monitoring system utilizes wireless cameras focused on individual nests as well as over the colony as a whole, and allows for observation without entering the colony. The video system is powered with several 12 V car batteries that are continuously recharged using solar panels. Footage is recorded using a digital video recorder (DVR) connected to a hard drive, which can be replaced when full. The DVR may be placed outside of the colony to reduce disturbance. In this study, 3,624 h of footage recorded over 63 days in weather conditions ranging from 12.8 °C to 35.0 °C produced 3,006 h (83%) of usable behavioral data. The types of data retrieved from the recorded video can vary; we used it to detect external disturbances and measure nesting behavior during incubation. Although the protocol detailed here was designed for ground-nesting waterbirds, the principal system could easily be modified to accommodate alternative scenarios, such as colonial arboreal nesting species, making it widely applicable to a variety of research needs.

Journal of Visualized Experiments↗

USGS2018

Examination of contaminant exposure and reproduction of ospreys (Pandion haliaetus) nesting in Delaware Bay and River in 2015

A study of ospreys ( Pandion haliaetus ) nesting in the coastal Inland Bays of Delaware, and the Delaware Bay and Delaware River in 2015 examined spatial and temporal trends in contaminant exposure, food web transfer and reproduction. Concentrations of organochlorine pesticides and metabolites, polychlorinated biphenyls (PCBs), coplanar PCB toxic equivalents, polybrominated diphenyl ethers (PBDEs) and other flame retardants in sample eggs were generally greatest in the Delaware River. Concentrations of legacy contaminants in 2015 Delaware Bay eggs were lower than values observed in the 1970s through early 2000s. Several alternative brominated flame retardants were rarely detected, with only TBPH [bis(2-ethylhexyl)-tetrabromophthalate)] present in 5 of 27 samples at <5 ng/g wet weight. No relation was found between p,p ′-DDE, total PCBs or total PBDEs in eggs with egg hatching, eggs lost from nests, nestling loss, fledging and nest success. Osprey eggshell thickness recovered to pre-DDT era values, and productivity was adequate to sustain a stable population. Prey fish contaminant concentrations were generally less than those in osprey eggs, with detection frequencies and concentrations greatest in white perch ( Morone americana ) from Delaware River compared to the Bay. Biomagnification factors from fish to eggs for p,p ′-DDE and total PCBs were generally similar to findings from several Chesapeake Bay tributaries. Overall, findings suggest that there have been improvements in Delaware Estuary waterbird habitat compared to the second half of the 20th century. This trend is in part associated with mitigation of some anthropogenic contaminant threats.

Delaware Bay and River↗

USGS2018

Use of Bank Swallow (Riparia riparia) burrows as shelter by Common Tern (Sterna hirundo) chicks

The availability of shelter to avoid predation and ameliorate physiologically stressful conditions is often important to the survival of avian hatchlings. However, as changes in habitat availability force birds to nest in nontraditional locations, young must quickly adapt to using novel sources of shelter. Two Common Tern (Sterna hirundo) colonies (one vegetated and one barren) were observed during the 2017 breeding season on a remote island habitat restoration project during data collection for a larger associated study. While chicks within the vegetated colony sought shade under vegetation, those in the barren colony were frequently found under anthropogenically constructed chick shelters. The first reported instance of Common Tern chicks using Bank Swallow (Riparia riparia) burrows for shelter was also observed in the barren colony. This behavior, when paired with other similar reports, suggests that this species is able to recognize beneficial shelters, both natural and anthropogenic, and use them at a young age, an important ability if they are to successfully reproduce in atypical habitats

Maryland↗

USGS2018

Preliminary evaluation of behavioral response of nesting waterbirds to small unmanned aircraft flight

Small unmanned aircraft systems present an emerging technology with the potential to survey colonial waterbird populations while reducing disturbance in comparison to traditional ground counts. Recent research with these systems has been performed on some colonially nesting avian species; however, none have focused on wading bird species. During 2015–2016, this study tested the behavioral response of a mixed-species rookery (Cattle Egret ( Bubulcus ibis ), Snowy Egret ( Egretta thula ), Glossy Ibis ( Plegadis falcinellus ) and a groundnesting colony of Common Terns ( Sterna hirundo )) in shrub habitat to small unmanned aircraft system flights at 12 m, 15 m, 30 m, and 50 m. Even at the lowest altitudes, the birds either showed no reaction or acclimated within 60 sec of the fly-over. Conversely, physically entering the colony to conduct ground surveys resulted in all Common Terns flushing from their nests beginning when the observer was 50 m away and required significantly more time in the colony overall: ~30–60 min vs. ~3–7 min with the small unmanned aircraft system. While this study focuses only on the behavioral response of nesting birds and not comparison of count estimates, these results provide preliminary evidence that small unmanned aircraft systems provide the potential to monitor colonial nesting bird populations while minimizing disturbance to the colony.

Waterbirds↗