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Bryan M. DeAngelis

Publications and source records attributed to Bryan M. DeAngelis.

3 recordsLinked to original sources

A novel framework to predict relative habitat selection in aquatic systems: Applying machine learning and resource selection functions to acoustic telemetry data from multiple shark species

Resource selection functions (RSFs) have been widely applied to animal tracking data to examine relative habitat selection and to help guide management and conservation strategies. While readily used in terrestrial ecology, RSFs have yet to be extensively used within marine systems. As acoustic telemetry continues to be a pervasive approach within marine environments, incorporation of RSFs can provide new insights to help prioritize habitat protection and restoration to meet conservation goals. To overcome statistical hurdles and achieve high prediction accuracy, machine learning algorithms could be paired with RSFs to predict relative habitat selection for a species within and even outside the monitoring range of acoustic receiver arrays, making this a valuable tool for marine ecologists and resource managers. Here, we apply RSFs using machine learning to an acoustic telemetry dataset of four shark species to explore and predict species-specific habitat selection within a marine protected area. In addition, we also apply this RSF-machine learning approach to investigate predator-prey relationships by comparing and averaging tiger shark relative selection values with the relative selection values derived for eight potential prey-species. We provide methodological considerations along with a framework and flexible approach to apply RSFs with machine learning algorithms to acoustic telemetry data and suggest marine ecologists and resource managers consider adopting such tools to help guide both conservation and management strategies.

Buck Island Reef National Monument, St Croix

Estimating and applying fish and invertebrate density and production enhancement from seagrass, salt marsh edge, and oyster reef nursery habitats in the Gulf of Mexico

Seagrasses, oyster reefs, and salt marshes are critical coastal habitats that support high densities of juvenile fish and invertebrates. Yet which species are enhanced through these nursery habitats, and to what degree, remains largely unquantified. Densities of young-of-year fish and invertebrates in seagrasses, oyster reefs, and salt marsh edges as well as in paired adjacent unstructured habitats of the northern Gulf of Mexico were compiled. Species consistently found at higher densities in the structured habitats were identified, and species-specific growth and mortality models were applied to derive production enhancement estimates arising from this enhanced density. Enhancement levels for fish and invertebrate production were similar for seagrass (1370 [SD 317] g m –2 y –1 for 25 enhanced species) and salt marsh edge habitats (1222 [SD 190] g m –2 y –1 , 25 spp.), whereas oyster reefs produced ~650 [SD 114] g m –2 y –1 (20 spp). This difference was partly due to lower densities of juvenile blue crab ( Callinectes sapidus ) on oyster reefs, although only oyster reefs enhanced commercially valuable stone crabs ( Menippe spp.). The production estimates were applied to Galveston Bay, Texas, and Pensacola Bay, Florida, for species known to recruit consistently in those embayments. These case studies illustrated variability in production enhancement by coastal habitats within the northern Gulf of Mexico. Quantitative estimates of production enhancement within specific embayments can be used to quantify the role of essential fish habitat, inform management decisions, and communicate the value of habitat protection and restoration.

Gulf of Mexico

Guidelines for evaluating performance of oyster habitat restoration

Restoration of degraded ecosystems is an important societal goal, yet inadequate monitoring and the absence of clear performance metrics are common criticisms of many habitat restoration projects. Funding limitations can prevent adequate monitoring, but we suggest that the lack of accepted metrics to address the diversity of restoration objectives also presents a serious challenge to the monitoring of restoration projects. A working group with experience in designing and monitoring oyster reef projects was used to develop standardized monitoring metrics, units, and performance criteria that would allow for comparison among restoration sites and projects of various construction types. A set of four universal metrics (reef areal dimensions, reef height, oyster density, and oyster size–frequency distribution) and a set of three universal environmental variables (water temperature, salinity, and dissolved oxygen) are recommended to be monitored for all oyster habitat restoration projects regardless of their goal(s). In addition, restoration goal-based metrics specific to four commonly cited ecosystem service-based restoration goals are recommended, along with an optional set of seven supplemental ancillary metrics that could provide information useful to the interpretation of prerestoration and postrestoration monitoring data. Widespread adoption of a common set of metrics with standardized techniques and units to assess well-defined goals not only allows practitioners to gauge the performance of their own projects but also allows for comparison among projects, which is both essential to the advancement of the field of oyster restoration and can provide new knowledge about the structure and ecological function of oyster reef ecosystems.

Restoration Ecology