Geology topics

Brian W. Avila

Publications and source records attributed to Brian W. Avila.

7 recordsLinked to original sources

USGS2025

Hatchery rearing density affects poststocking survival

Objective Research has indicated that salmonids raised in a hatchery and stocked into the wild have lower future survival and reproductive success than wild fish. Understanding whether hatchery rearing practices affect populations after stocking can help to maximize the quality, quantity, and economic value of fish stocked for conservation and recreational purposes. The goal of our study was to test whether and to what extent rearing density affects poststocking survival of Rainbow Trout Oncorhynchus mykiss when stocked into a put-grow-and-take fishery. Methods Rainbow Trout were raised for 3 months in the hatchery at two densities (high = 51,948–13,072 fish/m 3 , rearing index 2.0, 1,260 metric units; low = 12,987–3,268 fish/m 3 , rearing index 0.5, 315 metric units). A subset of the fish were PIT-tagged and stocked into Parvin Lake, Red Feather Lakes, Colorado. Recaptures of tagged fish occurred every 2 weeks for the first 2 months poststocking and at 7 and 12 months poststocking. Results At the time of stocking, there were no statistical differences in Fulton’s condition factor, total length, weight, or hepatosomatic index for each treatment. Recapture data indicated that there was no difference in Fulton’s condition factor and hepatosomatic index after stocking. Apparent poststocking survival was higher for fish raised at low density in the hatchery compared with those raised at high density. Conclusions Our study suggests that rearing density affects fingerling Rainbow Trout poststocking survival. Stocking more fish due to fish being reared at higher densities within the hatchery did not result in more total fish remaining after a year in the lake compared with the low-density treatment. Rearing fish at high densities does not provide a benefit of more fish after stocking and may result in more disease risk in the hatchery.

Colorado↗

USGS2025

Genetics of wild, whirling disease resistant rainbow trout populations in Colorado

Introduction: Myxobolus cerebralis , the parasite responsible for salmonid whirling disease, was unintentionally introduced to and became established in Colorado in the 1990s. Mortality of young-of-year fish due to infection by M. cerebralis resulted in recruitment failure and subsequent significant declines in Rainbow Trout ( Oncorhynchus mykiss ) populations. The complex multistage lifecycle of M. cerebralis makes it difficult to eradicate and manage, and hatchery control strategies do not work in the wild. A viable method that has been utilized for wild populations is enhancing host resistance. Myxobolus cerebralis resistant Rainbow Trout were discovered at a hatchery in Germany and subsequently incorporated into Colorado's brood stock program. Since 2004, M. cerebralis resistant strains have been stocked into all major Colorado coldwater drainages to re-establish Rainbow Trout populations after whirling disease-related declines, with documented survival and reproduction of stocked disease resistant fish. Methods and results: Genetic population assignment tests (via putatively neutral microsatellite markers) were used to monitor the stocked populations and indicated that, after only a few years, many of the individuals in these populations unexpectedly assigned to genetic strains that were historically susceptible to M. cerebralis . To further investigate the genetic composition of these fish, a single nucleotide polymorphism (SNP) panel was used to determine the percent genetic composition of resistant strain in these individuals. Microsatellites and SNPs provided similar results, indicating a low percentage of ancestry from the resistant strain in these fish, but they continued to survive exposure to M. cerebralis , suggesting that these individuals possessed genetic loci necessary for resistance. Finally, a quantitative trait locus (QTL) region (termed WDRES-9) was used to identify individuals with alleles associated with disease resistance. Implementation of the WDRES-9 QTL test allowed for more accurate determination of M. cerebralis resistant individuals within wild populations and better described their variability in resistance.

Colorado↗

USGS2022

Factors affecting post-challenge survival of Flavobacterium psychrophilum in susceptible rainbow trout from the literature

Infectious bacterial pathogens are a concern for aquaculture as estimates suggest that billions of US dollars are lost annually in aquaculture due to disease. One of the most prevalent salmonid pathogens is the bacterium Flavobacterium psychrophilum that causes bacterial coldwater disease. We reviewed the published F. psychrophilum literature and conducted a Bayesian analysis to examine large-scale patterns in rainbow trout ( Oncorhynchus mykiss ) mortality associated with laboratory challenge. We incorporated factors that were common across a majority of the laboratory exposure studies and these included bacterial dose, culture time, exposure method, bacterial isolate, experimental duration, and fish weight. The comparison showed that injection as the exposure method produced higher mortality than bath immersion, bacterial isolates differed in their effect on mortality, and bacterial dose has an interactive effect with fish weight and exposure method. Our comparison allows for inference on factors affecting rainbow trout mortality due to exposure to F. psychrophilum and suggests avenues to further optimize research protocols to better reach study goals.

Pathogens↗

USGS2022

Dual resistance to Flavobacterium psychrophilum and Myxobolus cerebralis in rainbow trout (Oncorhynchus mykiss, Walbaum)

Aquatic pathogens are a major concern for fish hatchery production, fisheries management, and conservation, and disease control needs to be addressed. Two important salmonid pathogens are Myxobolus cerebralis and Flavobacterium psychrophilum that cause whirling disease and bacterial coldwater disease (BCWD), respectively. Innate disease resistance is a potential option for reducing disease-related mortality in hatchery-reared rainbow trout ( Oncorhynchus mykiss , Walbaum). Two experiments were conducted to assess pathogen resistance of first-generation (F1) rainbow trout created by crossing M. cerebralis - and F. psychrophilum -resistant strains. In the first experiment, we exposed two rainbow trout strains and one F1 cross to six treatments: control (no exposure), mock injection, F. psychrophilum only, M. cerebralis only, F. psychrophilum then M. cerebralis , and M. cerebralis then F. psychrophilum . Results indicated that the F1 cross was not resistant to either pathogen. In the second experiment, we exposed five rainbow trout strains and four rainbow trout crosses to F. psychrophilum . The second experiment indicated that at least one rainbow trout cross was F . psychrophilum -resistant. Achieving dual resistance may be possible using selective breeding but only some multigenerational strains are suitable candidates for further evaluation.

Journal of Fish Diseases↗

USGS2022

Effects of 17α-ethinylestradiol and density on juvenile fathead minnow survival and body size

Anthropogenic changes have led to the increased use of wastewater treatment plants in stream systems near urbanized areas. Synthetic oral contraceptives, observed in wastewater treatment effluents, can cause negative effects on fish life history metrics. Previous exposures of 17α-ethinylestradiol (EE2) have been shown to affect survival and reproduction of fathead minnows ( Pimephales promelas ). However, density effects were not considered, and additional research is needed to examine the role of density among fish exposed to EE2. Multiple hypotheses indicate the interaction of density with contaminant exposure may ameliorate or exacerbate mortality. We examined how nominal EE2 concentrations of 0 ng/L, 5 ng/L, and 10 ng/L affect body size and mortality at various densities. Fish body size was influenced by density but not EE2 exposure. When density was high, we did not detect an effect of EE2 exposure on mortality. However, when density was low, EE2 exposures increased mortality. Thus, toxic effects of EE2 exposures were observable at low density but at high density, density-dependence in body size and mortality overwhelmed the effect of EE2. The results from our study provide insight into the relationship between density and EE2 exposures on fish survival and can be used to adjust population dynamic parameters for more accurate population dynamic estimates.

Journal of Aquatic Pollution and Toxicology↗

USGS2018

Survival of whirling disease resistant rainbow trout fry in the wild: A comparison of two strains

Introduced pathogens can affect fish populations, and three main factors affect disease occurrence: the environment, host, and pathogen. Manipulating at least one of these factors is necessary for controlling disease. Myxobolus cerebralis , the parasite responsible for salmonid whirling disease, became established in Colorado during the 1990s and caused significant declines in wild Rainbow Trout Oncorhynchus mykiss populations. Attempts to re-establish Rainbow Trout have focused on manipulating salmonid host resistance. A Rainbow Trout strain known as GR × CRR was developed for stocking in Colorado by crossing a whirling-disease-resistant strain known as the German Rainbow Trout (GR) with the Colorado River Rainbow Trout (CRR). The GR × CRR fish exhibit resistance similar to that shown by GR, and survival and reproduction were expected to be similar to those of CRR. One disadvantage of stocking GR × CRR is that outcrossing and backcrossing could decrease resistance, and laboratory studies have indicated that this can occur. A potential disadvantage of stocking pure GR is lower survival due to domestication. To compare fry survival between the strains, a field experiment was conducted in 1.6-km reaches of nine Colorado streams. Each stream was stocked in August 2014 with 5,000 GR × CRR and 5,000 GR individuals. In October 2014, April 2015, and August 2015, apparent survival was assessed. Two laboratory predation experiments were also conducted. The field experiment revealed that short-term apparent survival was influenced by stream, and growth rate was influenced by strain and stream. However, after 12 months, there was no difference in apparent survival or growth rate between the GR and GR × CRR strains. Laboratory experiments showed that survival did not differ between the strains when confronted with Brown Trout Salmo trutta predation. Our results indicate that the GR strain is a viable option for stocking in streams where M. cerebralis is enzootic. Further evaluation is needed to determine whether GR fish will survive to maturity and reproduce.

Journal of Aquatic Animal Health↗

USGS2014

Raft and floating radio frequency identification (RFID) antenna systems for detecting and estimating abundance of PIT-tagged fish in rivers

Portable radio frequency identification (RFID) PIT tag antenna systems are increasingly being used in studies examining aquatic animal movement, survival, and habitat use, and their design flexibility permits application in a wide variety of settings. We describe the construction, use, and performance of two portable floating RFID PIT tag antenna systems designed to detect fish that were unavailable for recapture using stationary antennas or electrofishing. A raft antenna system was designed to detect and locate PIT-tagged fish in relatively long (i.e., ≥10 km) river reaches, and consisted of two antennas: (1) a horizontal antenna (4 × 1.2 m) installed on the bottom of the raft and used to detect fish in shallower river reaches (<1 m), and (2) a vertical antenna (2.7 × 1.2 m) for detecting fish in deeper pools (≥1 m). Detection distances of the horizontal antenna were between 0.7 and 1.0 m, and detection probability was 0.32 ± 0.02 (mean ± SE) in a field test using rocks marked with 32-mm PIT tags. Detection probability of PIT-tagged fish in the Cache la Poudre River, Colorado, using the raft antenna system, which covered 21% of the wetted area, was 0.14 ± 0.14. A shore-deployed floating antenna (14.6 × 0.6 m), which covered 100% of the wetted area, was designed for use by two operators for detecting and locating PIT-tagged fish in shorter (i.e., <2 km) river reaches. Detection distances of the shore-deployed floating antenna were between 0.7 and 0.8 m, and detection probabilities during field deployment in the St. Vrain River exceeded 0.52. The shore-deployed floating antenna was also used to estimate abundance of PIT-tagged fish. Results suggest that the shore-deployed floating antenna could be used as an alternative to estimating abundance using traditional sampling methods such as electrofishing.

Colorado↗