Geology topics

B. Jaffe

Publications and source records attributed to B. Jaffe.

10 recordsLinked to original sources

USGS2017

Application of an unstructured 3D finite volume numerical model to flows and salinity dynamics in the San Francisco Bay-Delta

A linked modeling approach has been undertaken to understand the impacts of climate and infrastructure on aquatic ecology and water quality in the San Francisco Bay-Delta region. The Delft3D Flexible Mesh modeling suite is used in this effort for its 3D hydrodynamics, salinity, temperature and sediment dynamics, phytoplankton and water-quality coupling infrastructure, and linkage to a habitat suitability model. The hydrodynamic model component of the suite is D-Flow FM, a new 3D unstructured finite-volume model based on the Delft3D model. In this paper, D-Flow FM is applied to the San Francisco Bay-Delta to investigate tidal, seasonal and annual dynamics of water levels, river flows and salinity under historical environmental and infrastructural conditions. The model is driven by historical winds, tides, ocean salinity, and river flows, and includes federal, state, and local freshwater withdrawals, and regional gate and barrier operations. The model is calibrated over a 9-month period, and subsequently validated for water levels, flows, and 3D salinity dynamics over a 2 year period. Model performance was quantified using several model assessment metrics and visualized through target diagrams. These metrics indicate that the model accurately estimated water levels, flows, and salinity over wide-ranging tidal and fluvial conditions, and the model can be used to investigate detailed circulation and salinity patterns throughout the Bay-Delta. The hydrodynamics produced through this effort will be used to drive affiliated sediment, phytoplankton, and contaminant hindcast efforts and habitat suitability assessments for fish and bivalves. The modeling framework applied here will serve as a baseline to ultimately shed light on potential ecosystem change over the current century.

California↗

USGS2015

A 2-D process-based model for suspended sediment dynamics: A first step towards ecological modeling

In estuaries suspended sediment concentration (SSC) is one of the most important contributors to turbidity, which influences habitat conditions and ecological functions of the system. Sediment dynamics differs depending on sediment supply and hydrodynamic forcing conditions that vary over space and over time. A robust sediment transport model is a first step in developing a chain of models enabling simulations of contaminants, phytoplankton and habitat conditions. This works aims to determine turbidity levels in the complex-geometry delta of the San Francisco estuary using a process-based approach (Delft3D Flexible Mesh software). Our approach includes a detailed calibration against measured SSC levels, a sensitivity analysis on model parameters and the determination of a yearly sediment budget as well as an assessment of model results in terms of turbidity levels for a single year, water year (WY) 2011. Model results show that our process-based approach is a valuable tool in assessing sediment dynamics and their related ecological parameters over a range of spatial and temporal scales. The model may act as the base model for a chain of ecological models assessing the impact of climate change and management scenarios. Here we present a modeling approach that, with limited data, produces reliable predictions and can be useful for estuaries without a large amount of processes data.

Hydrology and Earth System Sciences↗

USGS2012

Predicted sedimentary record of reflected bores

Where a steep slope blocks an inrushing tsunami, the tsunami commonly reverses direction as a reflected bore. A simple method for relating vertical and horizontal variation in sediment size to output from numerical models of depth-averaged tsunami flow yields predictions about the sedimentary record of reflected bores: 1. Near the reflector, a abrupt slowing of the flow as the reflected bore passes is recorded by a normally graded layer that drapes preexisting topography. 2. At intermediate distances from the reflector, the deposit consists of a single normally graded bed deposited preferentially in depressions, possibly including a sharp fine-over-coarse contact. This contact records a brief period of erosion as the front of the reflected bore passes. 3. Far seaward of the reflector, grading in the deposit includes two distinct normally graded beds deposited preferentially in depressions separated by an erosional unconformity. The second normally graded bed records the reflected bore.

Conference Paper↗

USGS2012

Tsunami inundation and sediment transport in vicinity of coastal mangrove forest

Field measurements from Sumatra of tsunami wave height, erosion and deposition form a comprehensive data set that is tested against the Delft3D tsunami inundation and sediment transport model. Relative agreement between measured and modeled maximum water levels and sediment erosion and accumulation provides confidence that the model is reasonably characterizing the important processes of tsunami inundation. Adding a component to account for vegetation, the model is used to explore the effects of fringing mangrove forests on tsunami inundation and sedimentation. In model experiments, mangrove forests modify the water levels and flow speeds reached during tsunami inundation. Simulations with a mangrove forest result in sedimentation in the forest and not erosion, as occurs in the base case with no forest. This difference in sedimentation is important because the change in profile shape increases wave energy reflection off the beach and decreases wave energy penetration onto land.

Conference Paper↗

USGS2011

Wave characteristic and morphologic effects on the onshore hydrodynamic response of tsunamis

While the destruction caused by a tsunami can vary significantly owing to near- and onshore controls, we have only a limited quantitative understanding of how different local parameters influence the onshore response of tsunamis. Here, a numerical model based on the non-linear shallow water equations is first shown to agree well with analytical expressions developed for periodic long waves inundating over planar slopes. More than 13,000 simulations are then conducted to examine the effects variations in the wave characteristics, bed slopes, and bottom roughness have on maximum tsunami run-up and water velocity at the still water shoreline. While deviations from periodic waves and planar slopes affect the onshore dynamics, the details of these effects depend on a combination of factors. In general, the effects differ for breaking and non-breaking waves, and are related to the relative shift of the waves along the breaking–non-breaking wave continuum. Variations that shift waves toward increased breaking, such as steeper wave fronts, tend to increase the onshore impact of non-breaking waves, but decrease the impact of already breaking waves. The onshore impact of a tsunami composed of multiple waves can be different from that of a single wave tsunami, with the largest difference occurring on long, shallow onshore topographies. These results demonstrate that the onshore response of a tsunami is complex, and that using analytical expressions derived from simplified conditions may not always be appropriate.

Coastal Engineering↗

USGS2010

Field survey of the March 28, 2005 Nias-Simeulue earthquake and Tsunami

On the evening of March 28, 2005 at 11:09 p.m. local time (16:09 UTC), a large earthquake occurred offshore of West Sumatra, Indonesia. With a moment magnitude (Mw) of 8.6, the event caused substantial shaking damage and land level changes between Simeulue Island in the north and the Batu Islands in the south. The earthquake also generated a tsunami, which was observed throughout the source region as well as on distant tide gauges. While the tsunami was not as extreme as the tsunami of December 26th, 2004, it did cause significant flooding and damage at some locations. The spatial and temporal proximity of the two events led to a unique set of observational data from the earthquake and tsunami as well as insights relevant to tsunami hazard planning and education efforts. ?? 2010 Springer Basel AG.

Pure and Applied Geophysics↗

USGS2010

Mapping elevations of tidal wetland restoration sites in San Francisco Bay: Comparing accuracy of aerial lidar with a singlebeam echosounder

The southern edge of San Francisco Bay is surrounded by former salt evaporation ponds, where tidal flow has been restricted since the mid to late 1890s. These ponds are now the focus of a large wetland restoration project, and accurate measurement of current pond bathymetry and adjacent mud flats has been critical to restoration planning. Aerial light detection and ranging (lidar) has become a tool for mapping surface elevations, but its accuracy had rarely been assessed for wetland habitats. We used a singlebeam echosounder system we developed for surveying shallow wetlands to map submerged pond bathymetry in January of 2004 and compared those results with aerial lidar surveys in two ponds that were dry in May of 2004. From those data sets, we compared elevations for 5164 (Pond E9, 154 ha) and 2628 (Pond E14, 69 ha) echosounder and lidar points within a 0.375-m radius of each other (0.750-m diameter lidar spot size). We found that mean elevations of the lidar points were lower than the echosounder results by 5 ?? 0.1 cm in Pond E9 and 2 ?? 0.2 cm in Pond E14. Only a few points (5% in Pond E9, 2% in Pond E14) differed by more than 20 cm, and some of these values may be explained by residual water in the ponds during the lidar survey or elevation changes that occurred between surveys. Our results suggest that aerial lidar may be a very accurate and rapid way to assess terrain elevations for wetland restoration projects. ?? 2010 Coastal Education and Research Foundation.

Journal of Coastal Research↗

USGS2008

Sandy signs of a tsunami's onshore depth and speed

Tsunamis rank among the most devastating and unpredictable natural hazards to affect coastal areas. Just 3 years ago, in December 2004, the Indian Ocean tsunami caused more than 225,000 deaths. Like many extreme events, however, destructive tsunamis strike rarely enough that written records span too little time to quantify tsunami hazard and risk. Tsunami deposits preserved in the geologic record have been used to extend the record of tsunami occurrence but not the magnitude of past events. To quantify tsunami hazard further, we asked the following question: Can ancient deposits also provide guidance on the expectable water depths and speeds for future tsunamis?

Eos, Transactions, American Geophysical Union↗

USGS2006

Mapping South San Francisco Bay's seabed diversity for use in wetland restoration planning

In an effort to understand the role of sediment of South San Francisco Bay (South Bay) salt ponds, an acoustic seabed classification was performed with the condition of over two hundred sediment samples. The success of the large-scale tidal wetland restoration of up to 15,000 acres of South Bay partly depends on the ability of the converted ponds to acquire and retain enough sediment to support marsh growth. Determining the distribution of South Bay's seabed sediment types and understanding their potential erosive properties helps answer critical planning questions about sediment budgets and sediment transportation. Acoustic seabed classification is the organization of the seafloor into discrete units based on the characteristics of the acoustic response generated by an echosounder. Acoustic diversity is considered a proxy for geoacoustical parameters including acoustic impedance contrast, scatter and volume reverberation which all vary with sediment type. In addition, biological and anthropogenic features can influence the acoustic response. Data for an acoustic seabed classification were collected as a part of a California Coastal Conservancy funded bathymetric survey of South Bay in early 2005. A QTC VIEW seabed classification system recorded echoes from a sungle bean 50 kHz echosounder. Approximately 450,000 seabed classification records were generated from an are of of about 30 sq. miles. Ten district acoustic classes were identified through an unsupervised classification system using principle component and cluster analyses. One hundred and sixty-one grab samples and forty-five benthic community composition data samples collected in the study area shortly before and after the seabed classification survey, further refined the ten classes into groups based on grain size. A preliminary map of surficial grain size of South Bay was developed from the combination of the seabed classification and the grab and benthic samples. The initial seabed classification map, the grain size map, and locations of sediment samples will be displayed along with the methods of acousitc seabed classification.

Conference Paper↗

USGS2003

Erosion and sedimentation from the 17 July, 1998 Papua New Guinea tsunami

This paper describes erosion and sedimentation associated with the 17 July 1998 Papua New Guinea tsunami. Observed within two months of the tsunami, distinct deposits of a layer averaging 8-cm thick of gray sand rested on a brown muddy soil. In most cases the sand is normally graded, with more coarse sand near the base and fine sand at the top. In some cases the deposit contains rip-up clasts of muddy soil and in some locations it has a mud cap. Detailed measurements of coastal topography, tsunami flow height and direction indicators, and deposit thickness were made in the field, and samples of the deposit were collected for grain-size analysis in the laboratory. Four shore-normal transects were examined in detail to assess the shore-normal and along shore distribution of the tsunami deposit. Near the shoreline, the tsunami eroded approximately 10-25 cm of sand from the beach and berm. The sandy layer deposited by the tsunami began 50-150 m inland from the shoreline and extended across the coastal plain to within about 40 m of the limit of inundation; a total distance of up to 750 m from the beach. As much as 2/3 of the sand in the deposit originated from offshore. Across most of the coastal plain the deposit thickness and mean grain size varied little. In the along-shore direction the deposit thickness varied with the tsunami wave height; both largest near the entrance to Sissano Lagoon.

Pure and Applied Geophysics↗