Geology topics

Andrew C. Johnson

Publications and source records attributed to Andrew C. Johnson.

6 recordsLinked to original sources

USGS2021

Protocol for route restoration in California’s desert renewable energy conservation plan area

In the deserts of the Southwestern United States, increased off-highway vehicle use can lead to widespread vehicular damage to desert ecosystems. As the popularity and intensity of vehicle use on public lands continues, the Bureau of Land Management (BLM) is challenged to manage the routes used by recreationists while minimizing activity beyond designated routes and mitigating environmental impacts. Ecosystem function and habitat quality can be degraded by vehicle activities, especially when the activities are occurring outside authorized routes or authorized open areas. Restoration mitigates damage to soils and vegetation; however, methods vary across the desert, results appear to be inconsistent, and standardized monitoring plans do not exist. The Desert Renewable Energy Conservation Plan Land Use Plan Amendment to the California Desert Conservation Area Land Use Plan identified the need for, and directed implementation of, standardized monitoring of restoration, which includes minimizing surface disturbance to agency prescribed levels in areas of critical environmental concern and on California Desert National Conservation Lands. To assist the BLM in implementing the Desert Renewable Energy Conservation Plan Land Use Plan Amendment, we define ecological restoration as the process of halting or minimizing future degradation while simultaneously assisting the recovery of ecosystem function and community composition in relation to intact reference sites. The monitoring strategies provided in this protocol are used to restore degraded ecosystems after use of non-routes has ceased (non-designated routes or vehicle-caused linear disturbances) by applying techniques to improve edaphic properties, hydrologic function, and biotic community composition. This protocol also provides criteria that can be used to distinguish the status of non-routes and land parcels as “restored” or “disturbed.” This protocol was developed by the U.S. Geological Survey, in collaboration with BLM restoration practitioners, to identify standard restoration methods and establish criteria to determine when restoration is achieved. This protocol also develops new methods to increase restoration rates and successes on public lands in the southern California deserts. BLM’s long-term implementation plan for the evaluation of road restoration described in this report is to transition toward managing the work, including developing the workforce and long-term storage and management of the data during the next several years. This report is intended to be regularly updated as the program develops.

California↗

USGS2020

Annual adult survival drives trends in Arctic-breeding shorebirds but knowledge gaps in other vital rates remain

Conservation status and management priorities are often informed by population trends. Trend estimates can be derived from population surveys or models, but both methods are associated with sources of uncertainty. Many Arctic-breeding shorebirds are thought to be declining based on migration and/or overwintering population surveys, but data are lacking to estimate the trends of some shorebird species. In addition, for most species, little is known about the stage(s) at which population bottlenecks occur, such as breeding vs. nonbreeding periods. We used previously published and unpublished estimates of vital rates to develop the first large-scale population models for 6 species of Arctic-breeding shorebirds in North America, including separate estimates for 3 subspecies of Dunlin. We used the models to estimate population trends and identify life stages at which population growth may be limited. Our model for the arcticola subspecies of Dunlin agreed with previously published information that the subspecies is severely declining. Our results also linked the decline to the subspecies’ low annual survival rate, thus potentially implicating factors during the nonbreeding period in the East Asian-Australasian Flyway. However, our trend estimates for all species showed high uncertainty, highlighting the need for more accurate and precise estimates of vital rates. Of the vital rates, annual survival had the strongest influence on population trend in all taxa. Improving the accuracy, precision, and spatial and temporal coverage of estimates of vital rates, especially annual survival, would improve demographic model-based estimates of population trends and help direct management to regions or seasons where birds are subject to higher mortality.

The Condor↗

USGS2018

Life‐history tradeoffs revealed by seasonal declines in reproductive traits of Arctic‐breeding shorebirds

Seasonal declines in breeding performance are widespread in wild animals, resulting from temporal changes in environmental conditions or from individual variation. Seasonal declines might drive selection for early breeding, with implications for other stages of the annual cycle. Alternatively, selection on the phenology of nonbreeding stages could constrain timing of the breeding season and lead to seasonal changes in reproductive performance. We studied 25 taxa of migratory shorebirds (including five subspecies) at 16 arctic sites in Russia, Alaska, and Canada. We investigated seasonal changes in four reproductive traits, and developed a novel Bayesian risk‐partitioning model of daily nest survival to examine seasonal trends in two causes of nest failure. We found strong seasonal declines in reproductive traits for a subset of species. The probability of laying a full four‐egg clutch declined by 8–78% in 12 of 25 taxa tested, daily nest survival rates declined by 1–12% in eight of 22 taxa, incubation duration declined by 2.0–2.5% in two of seven taxa, and mean egg volume declined by 5% in one of 15 taxa. Temporal changes were not fully explained by individual variation. Across all species, the proportion of failed nests that were depredated declined over the season from 0.98 to 0.60, while the proportion abandoned increased from 0.01 to 0.35 and drove the seasonal declines in nest survival. An increase in abandonment of late nests is consistent with a life‐history tradeoff whereby either adult mortality increased or adults deserted the breeding attempt to maximize adult survival. In turn, seasonal declines in clutch size and incubation duration might be adaptive to hasten hatching of later nests. In other species of shorebirds, we found no seasonal patterns in breeding performance, suggesting that some species are not subject to selective pressure for early breeding.

Journal of Avian Biology↗

USGS2018

Effects of environmental conditions on reproductive effort and nest success of Arctic‐breeding shorebirds

The Arctic is experiencing rapidly warming conditions, increasing predator abundance, and diminishing population cycles of keystone species such as lemmings. However, it is still not known how many Arctic animals will respond to a changing climate with altered trophic interactions. We studied clutch size, incubation duration and nest survival of 17 taxa of Arctic‐breeding shorebirds at 16 field sites over 7 years. We predicted that physiological benefits of higher temperatures and earlier snowmelt would increase reproductive effort and nest survival, and we expected increasing predator abundance and decreasing abundance of alternative prey (arvicoline rodents) to have a negative effect on reproduction. Although we observed wide ranges of conditions during our study, we found no effects of covariates on reproductive traits in 12 of 17 taxa. In the remaining taxa, most relationships agreed with our predictions. Earlier snowmelt increased the probability of laying a full clutch from 0.61 to 0.91 for Western Sandpipers, and shortened incubation by 1.42 days for arcticola Dunlin and 0.77 days for Red Phalaropes. Higher temperatures increased the probability of a full clutch from 0.60 to 0.93 for Western Sandpipers and from 0.76 to 0.97 for Red‐necked Phalaropes, and increased daily nest survival rates from 0.9634 to 0.9890 for Semipalmated Sandpipers and 0.9546 to 0.9880 for Western Sandpipers. Higher abundance of predators (foxes) reduced daily nest survival rates only in Western Sandpipers (0.9821–0.9031). In contrast to our predictions, the probability of a full clutch was lowest (0.83) for Semipalmated Sandpipers at moderate abundance of alternative prey, rather than low abundance (0.90). Our findings suggest that in the short‐term, climate warming may have neutral or positive effects on the nesting cycle of most Arctic‐breeding shorebirds.

Ibis↗

USGS2016

Effects of geolocators on hatching success, return rates, breeding movements, and change in body mass in 16 species of Arctic-breeding shorebirds

Background Geolocators are useful for tracking movements of long-distance migrants, but potential negative effects on birds have not been well studied. We tested for effects of geolocators (0.8–2.0 g total, representing 0.1–3.9 % of mean body mass) on 16 species of migratory shorebirds, including five species with 2–4 subspecies each for a total of 23 study taxa. Study species spanned a range of body sizes (26–1091 g) and eight genera, and were tagged at 23 breeding and eight nonbreeding sites. We compared breeding performance and return rates of birds with geolocators to control groups while controlling for potential confounding variables. Results We detected negative effects of tags for three small-bodied species. Geolocators reduced annual return rates for two of 23 taxa: by 63 % for semipalmated sandpipers and by 43 % for the arcticola subspecies of dunlin. High resighting effort for geolocator birds could have masked additional negative effects. Geolocators were more likely to negatively affect return rates if the total mass of geolocators and color markers was 2.5–5.8 % of body mass than if tags were 0.3–2.3 % of body mass. Carrying a geolocator reduced nest success by 42 % for semipalmated sandpipers and tripled the probability of partial clutch failure in semipalmated and western sandpipers. Geolocators mounted perpendicular to the leg on a flag had stronger negative effects on nest success than geolocators mounted parallel to the leg on a band. However, parallel-band geolocators were more likely to reduce return rates and cause injuries to the leg. No effects of geolocators were found on breeding movements or changes in body mass. Among-site variation in geolocator effect size was high, suggesting that local factors were important. Conclusions Negative effects of geolocators occurred only for three of the smallest species in our dataset, but were substantial when present. Future studies could mitigate impacts of tags by reducing protruding parts and minimizing use of additional markers. Investigators could maximize recovery of tags by strategically deploying geolocators on males, previously marked individuals, and successful breeders, though targeting subsets of a population could bias the resulting migratory movement data in some species.

Movement Ecology↗

USGS2005

Initial results of rover localization and topographic mapping for the 2003 mars exploration rover mission

This paper presents the initial results of lander and rover localization and topographic mapping of the MER 2003 mission (by Sol 225 for Spirit and Sol 206 for Opportunity). The Spirit rover has traversed a distance of 3.2 km (actual distance traveled instead of odometry) and Opportunity at 1.2 km. We localized the landers in the Gusev Crater and on the Meridiani Planum using two-way Doppler radio positioning technology and cartographic triangulations through landmarks visible in both orbital and ground images. Additional high-resolution orbital images were taken to verify the determined lander positions. Visual odometry and bundle-adjustment technologies were applied to overcome wheel slippages, azimuthal angle drift and other navigation errors (as large as 21 percent). We generated timely topographic products including 68 orthophoto maps and 3D Digital Terrain Models, eight horizontal rover traverse maps, vertical traverse profiles up to Sol 214 for Spirit and Sol 62 for Opportunity, and five 3D crater models. A web-based landing-site Geographic Information System (GIS) has been set up at The Ohio State University to update and disseminate the daily localization and topographic information to support tactical and strategic operations of the mission. Also described in this paper are applications of the data for science operations planning, geological traverse survey, survey of wind-related features, and other science applications. The majority of the instruments onboard both rovers are healthy at this moment, and they will continue to explore the two landing sites on the Martian surface. We expect to report further localization and topographic mapping results to be achieved in the rest of the mission period and in post-mission data processing.

Photogrammetric Engineering and Remote Sensing↗