Geology topics

Amanda T. Flynn

Publications and source records attributed to Amanda T. Flynn.

7 recordsLinked to original sources

USGS2024

Development of a hydrogeologic visualization model for western Sarpy County, Nebraska

Population in western Sarpy County, Nebraska, has steadily increased over the last several decades and has led to increased groundwater use for domestic purposes. To meet the increase in demand, the Papio-Missouri River Natural Resources District is seeking to use all available sources of groundwater in western Sarpy County. Additionally, elevated groundwater nitrate plus nitrite as nitrogen concentrations were detected, indicating the need to better understand the groundwater quality of the area. Although the general geology of the area is understood, the area does not have detailed information on the extent of the various aquifers, particularly the Dakota aquifer. To characterize these aquifers, the Papio-Missouri River Natural Resources District invested in airborne electromagnetic surveys of the area to better understand the subsurface geology. Although these surveys improved understanding of the groundwater systems in the area, the Papio-Missouri River Natural Resources District wanted to integrate the subsurface information with available water-quality and groundwater-level data. In response, the U.S. Geological Survey, in cooperation with the Papio-Missouri River Natural Resources District, the Nebraska Natural Resources Commission, and the Nebraska Department of Natural Resources, assembled geologic, hydrogeologic and nitrate plus nitrite as nitrogen information for the selected area into a three-dimensional visualization computer software package called GeoScene3D. The completed GeoScene3D project was assembled to provide a visualization of the groundwater systems and associated water-quality results in Sarpy County and to provide the Papio-Missouri River Natural Resources District managers with information that can be used to make more informed groundwater resource-planning decisions in the future. This report details the development of a three-dimensional model created within GeoScene3D to visualize the subsurface, particularly the Dakota Sandstone in western Sarpy County.

Nebraska↗

USGS2023

Selected anthropogenic contaminants in groundwater, Papio-Missouri River Natural Resources District, eastern Nebraska, 1992–2020

A study in cooperation with the Papio-Missouri River Natural Resources District was completed in 2019 to determine the concentration of contaminants of emerging concern (CEC) in groundwater in the Papio-Missouri River Natural Resources District, eastern Nebraska. Each well was sampled twice (in June and October or November) in 2019, totaling 34 samples. Samples were analyzed for 132 CECs, which include pharmaceutical, steroid hormone, and other organic chemicals. Seven of the 132 CEC analytes were detected in samples collected during this study. The most commonly detected CEC in this study was the antibiotic sulfamethoxazole. Other CECs detected in this study were nicotine, methyl-1 H -benzotiazole (industrial product), acetaminophen (analgesic), caffeine, and metformin (diabetes medicine). None of the detected CECs have health-based water-quality standards. The agricultural herbicide atrazine was also sampled for and was detected in 15 of 26 samples from 8 wells, but all samples were below the established water-quality standard. Nitrate, dissolved oxygen, and iron sampling results for 2010–19 and 1992–2020 were also assessed to determine the extent and trend of anthropogenic contamination in the Papio-Missouri River Natural Resources District. Nitrate as nitrogen was detected at a concentration greater than 4 milligrams per liter in 92 samples (19 percent), and detections in 36 samples (7.6 percent) exceeded 10 milligrams per liter, which is the U.S. Environmental Protection Agency’s maximum contaminant level for drinking water and Nebraska’s Title 118 maximum contaminant level for groundwater. Time series analysis showed that nitrate concentrations are not increasing or decreasing in any of the aquifers except for in three specific well nests, which are in phase 2 management areas. Dissolved oxygen results indicate potential denitrification throughout the Elkhorn alluvial aquifer; iron concentrations indicate potential denitrification in parts of the Missouri River alluvial aquifer.

Nebraska↗

USGS2021

Groundwater quality and age of secondary bedrock aquifers in the glaciated portion of eastern Nebraska, 2016–18

The Eastern Nebraska Water Resources Assessment (ENWRA) project was initiated in 2006 to assist water managers by developing a hydrogeologic framework and water budget for the glaciated portion of eastern Nebraska. Within the ENWRA area, the primary groundwater sources for municipal, domestic, and irrigation water needs are provided by withdrawals from alluvial, buried paleovalley, and the High Plains aquifer (where present). Generally, other bedrock aquifers are considered a secondary water source. However, in some areas, such as parts of Sarpy and Nemaha Counties, these secondary bedrock aquifers are the only source of water within glaciated upland areas. To improve the understanding of the quality, geochemistry, and age of groundwater from bedrock aquifers, the U.S. Geological Survey (USGS), in cooperation with the ENWRA group, which includes the Lewis and Clark, Lower Elkhorn, Lower Platte North, Lower Platte South, Nemaha, and Papio-Missouri River Natural Resources Districts, designed a study to sample 31 wells completed in the secondary bedrock aquifers and analyze samples for major ions, physical properties, nutrients, stable isotopes, and selected age tracers. Of the 31 samples collected for this report, 22 samples were collected from the Dakota aquifer contained in the Dakota Sandstone, 3 from the Niobrara aquifer contained in the Niobrara Formation of Colorado Group, and 6 from Paleozoic aquifers contained in undifferentiated Paleozoic-age units. The results of this study indicate that major ion data collected from the Dakota aquifer can be used for assessing the quality, recharge source, and age of groundwater. Calcium bicarbonate dominant samples were characterized as modern or mixed, indicating that, in these areas, groundwater is unconfined and is recharged by precipitation and (or) surface water. If groundwater extraction rates exceed recharge rates, total dissolved solid concentrations may increase as a result of upwelling of groundwater from deeper units or formations, which can adversely affect groundwater quality. Sampling results presented in this report indicate water quality is good, but that groundwater in the Dakota aquifer with calcium bicarbonate water type may be vulnerable to surface contamination. In contrast, groundwater sampled from the Dakota aquifer, having a dominant water type other than calcium bicarbonate, generally has low dissolved oxygen and nitrate concentrations, and higher concentrations of total dissolved solids and trace elements, including iron and strontium. The geochemical characteristics of noncalcium bicarbonate samples from the Dakota aquifer indicated confining conditions and limited groundwater recharge from local precipitation. Apparent groundwater ages estimated from radiocarbon (carbon-14) sampling of noncalcium bicarbonate samples from the Dakota aquifer indicated that the time of groundwater recharge to the Dakota aquifer occurred during Pleistocene time. Depleted stable isotopes results indicate recharge during a colder climate. Groundwater under confined conditions is not easily recharged from precipitation or surface water. Future groundwater-level monitoring in locations where the Dakota aquifer appears to be confined could provide information to evaluate whether groundwater supplies remain sufficient to meet future municipal, domestic, and irrigation needs. For the Niobrara aquifer and Paleozoic aquifers, the dominant water type was not a diagnostic indicator of recharge source, age, and groundwater quality as with the Dakota aquifer. Most likely this is because the host formation was dominated by calcium-carbonate-rich rocks; however, few samples were collected from these aquifers to be able to confirm this interpretation. Samples collected from wells completed in the Niobrara aquifer and Paleozoic aquifers and characterized as calcium sulfate water type have statistically significantly higher concentrations of total dissolved solids compared to other samples from the Niobrara aquifer and Paleozoic aquifers characterized as calcium bicarbonate. Given that six of the nine of samples collected from the Niobrara and Paleozoic aquifers indicated modern recharge, these secondary bedrock aquifers are reliant on precipitation to sustain groundwater levels and may be vulnerable to a multiyear drought. Well yields of the Niobrara and Paleozoic aquifers are dependent on the presence of secondary porosity and these units offer little storage. Samples collected from wells completed in Paleozoic aquifers were the most isotopically enriched and similar to modern precipitation and had the highest concentrations of nitrate, indicating that groundwater is affected by agricultural activities. Future groundwater sampling would be beneficial to characterize groundwater-quality changes within the Niobrara and Paleozoic aquifers over time.

Nebraska↗

USGS2018

Simulation of groundwater flow, 1895–2010, and effects of additional groundwater withdrawals on future stream base flow in the Elkhorn and Loup River Basins, central Nebraska—Phase three

The U.S. Geological Survey, in cooperation with the Lewis and Clark, Lower Elkhorn, Lower Loup, Lower Platte North, Lower Niobrara, Middle Niobrara, Upper Elkhorn, and the Upper Loup Natural Resources Districts, designed a study to refine the spatial and temporal discretization of a previously modeled area. This updated study focused on a 30,000-square-mile area of the High Plains aquifer and constructed regional groundwater-flow models to evaluate the effects of groundwater withdrawal on stream base flow in the Elkhorn and Loup River Basins, Nebraska. The model was calibrated to match groundwater-level and base-flow data from the stream-aquifer system from pre-1940 through 2010 (including predevelopment [pre-1895], early development [1895–1940], and historical development [1940 through 2010] conditions) using an automated parameter-estimation method. The calibrated model then was used to simulate hypothetical development conditions (2011 through 2060). Predicted changes to stream base flow based on simulated changes to groundwater withdrawal will aid in developing strategies for management of hydrologically connected water supplies. Additional wells were simulated throughout the model domain and pumped for 50 years to assess the effect of wells on aquifer depletions, including stream base flow. The percentage of withdrawal for each well after 50 years, which was compensated by aquifer reductions to stream base flow, storage, or evapotranspiration, was computed and mapped. These depletions are influenced by aquifer properties, time, and distance from the well. Stream base-flow depletion results showed that the closer the added well was to a stream, the greatest the effect on the stream base flow. Areas of stream base-flow depletion percentages greater than 80 percent were generally within 1 mile (mi) from the stream. The distance increased to 6 mi near the confluence of the Dismal and Middle Loup Rivers, and the North Loup and Calamus Rivers. The percentage of stream base-flow depletion decreased as the distance from the stream increased. Areas more than 10 mi from the stream generally had a stream base-flow depletion of 10 percent or less. Evapotranspiration depletion was largest in areas closest to streams, specifically in the Elkhorn River watershed. It was also larger in areas of interdunal wetlands within the Sand Hills. Evapotranspiration depletion was negligible in areas greater than 5 mi from a stream, with the exception of interdunal areas in Cherry, Grant, and Arthur Counties. The storage depletion percentage increased as the distance from a stream increased. Storage depletion was largest in areas between streams. Areas experiencing the smallest amount of storage depletion were adjacent to streams. Calibrated model outputs and streamflow depletion analysis are publicly available online. Accuracy of the simulations is affected by input data limitations, system simplifications, assumptions, and resources available at the time of the simulation construction and calibration. Most of the important limitations relate either to data used as simulation inputs or to data used to estimate simulation inputs. Development of the regional simulations focused on generalized hydrogeologic characteristics within the study area and did not attempt to describe variations important to local-scale conditions. These simulations are most appropriate for analyzing groundwater-management scenarios for large areas and during long periods and are not suitable for analysis of small areas or short periods.

Nebraska↗

USGS2016

Groundwater-flow model of the northern High Plains aquifer in Colorado, Kansas, Nebraska, South Dakota, and Wyoming

The High Plains aquifer is a nationally important water resource underlying about 175,000 square miles in parts of eight states: Colorado, Kansas, Oklahoma, Nebraska, New Mexico, South Dakota, Texas, and Wyoming. Droughts across much of the Northern High Plains from 2001 to 2007 have combined with recent (2004) legislative mandates to elevate concerns regarding future availability of groundwater and the need for additional information to support science-based water-resource management. To address these needs, the U.S. Geological Survey began the High Plains Groundwater Availability Study to provide a tool for water-resource managers and other stakeholders to assess the status and availability of groundwater resources. A transient groundwater-flow model was constructed using the U.S. Geological Survey modular three-dimensional finite-difference groundwater-flow model with Newton-Rhapson solver (MODFLOW–NWT). The model uses an orthogonal grid of 565 rows and 795 columns, and each grid cell measures 3,281 feet per side, with one variably thick vertical layer, simulated as unconfined. Groundwater flow was simulated for two distinct periods: (1) the period before substantial groundwater withdrawals, or before about 1940, and (2) the period of increasing groundwater withdrawals from May 1940 through April 2009. A soil-water-balance model was used to estimate recharge from precipitation and groundwater withdrawals for irrigation. The soil-water-balance model uses spatially distributed soil and landscape properties with daily weather data and estimated historical land-cover maps to calculate spatial and temporal variations in potential recharge. Mean annual recharge estimated for 1940–49, early in the history of groundwater development, and 2000–2009, late in the history of groundwater development, was 3.3 and 3.5 inches per year, respectively. Primary model calibration was completed using statistical techniques through parameter estimation using the parameter estimation suite of software with Tikhonov regularization. Calibration targets for the groundwater model included 343,067 groundwater levels measured in wells and 10,820 estimated monthly stream base flows at streamgages. A total of 1,312 parameters were adjusted during calibration to improve the match between calibration targets and simulated equivalents. Comparison of calibration targets to simulated equivalents indicated that, at the regional scale, the model correctly reproduced groundwater levels and stream base flows for 1940–2009. This comparison indicates that the model can be used to examine the likely response of the aquifer system to potential future stresses. Mean calibrated recharge for 1940–49 and 2000–2009 was smaller than that estimated with the soil-water-balance model. This indicated that although the general spatial patterns of recharge estimated with the soil-water-balance model were approximately correct at the regional scale of the Northern High Plains aquifer, the soil-water-balance model had overestimated recharge, and adjustments were needed to decrease recharge to improve the match of the groundwater model to calibration targets. The largest components of the simulated groundwater budgets were recharge from precipitation, recharge from canal seepage, outflows to evapotranspiration, and outflows to stream base flow. Simulated outflows to irrigation wells increased from 7 percent of total outflows in 1940–49 to 38 percent of 1970–79 total outflows and 49 percent of 2000–2009 total outflows.

Colorado, Kansas, Nebraska, South Dakota, Wyoming↗

USGS2015

Simulation of groundwater flow and analysis of the effects of water-management options in the North Platte Natural Resources District, Nebraska

The North Platte Natural Resources District (NPNRD) has been actively collecting data and studying groundwater resources because of concerns about the future availability of the highly inter-connected surface-water and groundwater resources. This report, prepared by the U.S. Geological Survey in cooperation with the North Platte Natural Resources District, describes a groundwater-flow model of the North Platte River valley from Bridgeport, Nebraska, extending west to 6 miles into Wyoming. The model was built to improve the understanding of the interaction of surface-water and groundwater resources, and as an optimization tool, the model is able to analyze the effects of water-management options on the simulated stream base flow of the North Platte River. The groundwater system and related sources and sinks of water were simulated using a newton formulation of the U.S. Geological Survey modular three-dimensional groundwater model, referred to as MODFLOW–NWT, which provided an improved ability to solve nonlinear unconfined aquifer simulations with wetting and drying of cells. Using previously published aquifer-base-altitude contours in conjunction with newer test-hole and geophysical data, a new base-of-aquifer altitude map was generated because of the strong effect of the aquifer-base topography on groundwater-flow direction and magnitude. The largest inflow to groundwater is recharge originating from water leaking from canals, which is much larger than recharge originating from infiltration of precipitation. The largest component of groundwater discharge from the study area is to the North Platte River and its tributaries, with smaller amounts of discharge to evapotranspiration and groundwater withdrawals for irrigation. Recharge from infiltration of precipitation was estimated with a daily soil-water-balance model. Annual recharge from canal seepage was estimated using available records from the Bureau of Reclamation and then modified with canal-seepage potentials estimated using geophysical data. Groundwater withdrawals were estimated using land-cover data, precipitation data, and published crop water-use data. For fields irrigated with surface water and groundwater, surface-water deliveries were subtracted from the estimated net irrigation requirement, and groundwater withdrawal was assumed to be equal to any demand unmet by surface water. The groundwater-flow model was calibrated to measured groundwater levels and stream base flows estimated using the base-flow index method. The model was calibrated through automated adjustments using statistical techniques through parameter estimation using the parameter estimation suite of software (PEST). PEST was used to adjust 273 parameters, grouped as hydraulic conductivity of the aquifer, spatial multipliers to recharge, temporal multipliers to recharge, and two specific recharge parameters. Base flow of the North Platte River at Bridgeport, Nebraska, streamgage near the eastern, downstream end of the model was one of the primary calibration targets. Simulated base flow reasonably matched estimated base flow for this streamgage during 1950–2008, with an average difference of 15 percent. Overall, 1950–2008 simulated base flow followed the trend of the estimated base flow reasonably well, in cases with generally increasing or decreasing base flow from the start of the simulation to the end. Simulated base flow also matched estimated base flow reasonably well for most of the North Platte River tributaries with estimated base flow. Average simulated groundwater budgets during 1989–2008 were nearly three times larger for irrigation seasons than for non-irrigation seasons. The calibrated groundwater-flow model was used with the Groundwater-Management Process for the 2005 version of the U.S. Geological Survey modular three-dimensional groundwater model, MODFLOW–2005, to provide a tool for the NPNRD to better understand how water-management decisions could affect stream base flows of the North Platte River at Bridgeport, Nebr., streamgage in a future period from 2008 to 2019 under varying climatic conditions. The simulation-optimization model was constructed to analyze the maximum increase in simulated stream base flow that could be obtained with the minimum amount of reductions in groundwater withdrawals for irrigation. A second analysis extended the first to analyze the simulated base-flow benefit of groundwater withdrawals along with application of intentional recharge, that is, water from canals being released into rangeland areas with sandy soils. With optimized groundwater withdrawals and intentional recharge, the maximum simulated stream base flow was 15–23 cubic feet per second (ft 3 /s) greater than with no management at all, or 10–15 ft 3 /s larger than with managed groundwater withdrawals only. These results indicate not only the amount that simulated stream base flow can be increased by these management options, but also the locations where the management options provide the most or least benefit to the simulated stream base flow. For the analyses in this report, simulated base flow was best optimized by reductions in groundwater withdrawals north of the North Platte River and in the western half of the area. Intentional recharge sites selected by the optimization had a complex distribution but were more likely to be closer to the North Platte River or its tributaries. Future users of the simulation-optimization model will be able to modify the input files as to type, location, and timing of constraints, decision variables of groundwater withdrawals by zone, and other variables to explore other feasible management scenarios that may yield different increases in simulated future base flow of the North Platte River.

Nebraska↗

USGS2013

Geodatabase compilation of hydrogeologic, remote sensing, and water-budget-component data for the High Plains aquifer, 2011

The High Plains aquifer underlies almost 112 million acres in the central United States. It is one of the largest aquifers in the Nation in terms of annual groundwater withdrawals and provides drinking water for 2.3 million people. The High Plains aquifer has gained national and international attention as a highly stressed groundwater supply primarily because it has been appreciably depleted in some areas. The U.S. Geological Survey has an active program to monitor the changes in groundwater levels for the High Plains aquifer and has documented substantial water-level changes since predevelopment: the High Plains Groundwater Availability Study is part of a series of regional groundwater availability studies conducted to evaluate the availability and sustainability of major aquifers across the Nation. The goals of the regional groundwater studies are to quantify current groundwater resources in an aquifer system, evaluate how these resources have changed over time, and provide tools to better understand a systems response to future demands and environmental stresses. The purpose of this report is to present selected data developed and synthesized for the High Plains aquifer as part of the High Plains Groundwater Availability Study. The High Plains Groundwater Availability Study includes the development of a water-budget-component analysis for the High Plains completed in 2011 and development of a groundwater-flow model for the northern High Plains aquifer. Both of these tasks require large amounts of data about the High Plains aquifer. Data pertaining to the High Plains aquifer were collected, synthesized, and then organized into digital data containers called geodatabases. There are 8 geodatabases, 1 file geodatabase and 7 personal geodatabases, that have been grouped in three categories: hydrogeologic data, remote sensing data, and water-budget-component data. The hydrogeologic data pertaining to the northern High Plains aquifer is included in three separate geodatabases: (1) base data from a groundwater-flow model; (2) hydrogeology and hydraulic properties data; and (3) groundwater-flow model data to be used as calibration targets. The remote sensing data for this study were developed by the U. S. Geological Survey Earth Resources Observation and Science Center and include historical and predicted land-use/land-cover data and actual evapotranspiration data by using remotely sensed temperature data. The water-budget-component data contains selected raster data from maps in the “Selected Approaches to Estimate Water-Budget Components of the High Plains, 1940 Through 1949 and 2000 Through 2009” report completed in 2011 ( http://pubs.usgs.gov/sir/2011/5183/ ). Federal Geographic Data Committee compliant metadata were created for each spatial and tabular data layer in the geodatabases.

Colorado, Kansas, Nebraska, New Mexico, Oklahoma, ↗