Geology topics

Allen Jeffrey Herbst

Publications and source records attributed to Allen Jeffrey Herbst.

4 recordsLinked to original sources

USGS2026

Digging into soil: Effects of soil texture on RT-QuIC performance for environmental prion surveillance.

Chronic wasting disease (CWD) is a fatal neurodegenerative disease caused by infectious prions affecting wild and captive cervids. Transmission occurs directly between hosts or indirectly through contact with prion-contaminated environments. Soils, particularly those rich in clay, are hypothesized to enhance prion stability, retention, and bioavailability. Accurate detection of prions is therefore important for understanding environmental transmission risks. Real-time quaking-induced conversion (RT-QuIC) is a sensitive assay used to detect PrP CWD in tissue, excreta, and environmental materials. However, RT-QuIC performance across soil textures has not been evaluated. This study assessed RT-QuIC sensitivity and specificity using laboratory-prepared soils spiked with CWD-positive brain homogenate or water controls under a standardized extraction method. Conditional on the extraction method used, results suggest that RT-QuIC performance depends on soil texture, and thus, an optimal time-to-threshold (TTT) cutoff required to balance sensitivity and specificity will also vary with soil texture. RT-QuIC exhibited higher sensitivity and moderate specificity in soils with low clay (<20%) and moderate to high silt content, whereas high-clay soils (>20%) with low to moderate silt content (2%–60%) reduced both sensitivity and specificity, and required shorter TTT cutoffs. These findings highlight the importance of accounting for soil texture in environmental CWD surveillance.

Environmental Science and Technology↗

USGS2025

Overview of North American isolates of chronic wasting disease used for strain research

Chronic Wasting Disease (CWD) is a prion disease that affects Cervidae species, and is the only known prion disease transmitted among wildlife species. The key pathological feature is the conversion of the normal prion protein (PrP C ) misfolding into abnormal forms (PrP Sc ), triggering the onset of CWD infections. The misfolding can generate distinct PrP Sc conformations (strains) giving rise to diverse disease phenotypes encompassing pathology, incubation period, and clinical signs. These phenotypes operationally define distinct prion strains, a pivotal element in monitoring CWD spread and zoonotic potential—a complex endeavor compounded by defining and tracking CWD strains. This review pursues a tripartite objective: 1. to address the intricate challenges inherent in ongoing CWD strain classification; 2. to provide an overview of the known CWD-infected isolates, the strains they represent and their passage history; and 3. to describe the spatial diversity of CWD strains in North America, enriching our understanding of CWD strain dynamics. By delving into these dimensions, this review sheds light on the intricate interplay among polymorphisms, biochemical properties, and clinical expressions of CWD. This endeavor aims to elevate the trajectory of CWD research, advancing our insight into prion disease.

Pathogens↗

USGS2024

Chronic wasting disease: State of the science

Chronic wasting disease (CWD) is a prion disease affecting cervid species, both free-ranging and captive populations. As the geographic range continues to expand and disease prevalence continues to increase, CWD will have an impact on cervid populations, local economies, and ecosystem health. Mitigation of this “wicked” disease will require input from many different stakeholders including hunters, landowners, research biologists, wildlife managers, and others, working together. The NC1209 (North American interdisciplinary chronic wasting disease research consortium) is composed of scientists from different disciplines involved with investigating and managing CWD. Leveraging this broad breadth of expertise, the Consortium has created a state-of-the-science review of five key aspects of CWD, including current diagnostic capabilities for detecting prions, requirements for validating these diagnostics, the role of environmental transmission in CWD dynamics, and potential zoonotic risks associated with CWD. The goal of this review is to increase stakeholders’, managers’, and decision-makers’ understanding of this disease informed by current scientific knowledge.

Pathogens↗

USGS2022

Susceptibility of beavers to chronic wasting disease

Chronic wasting disease (CWD) is a contagious, fatal, neurodegenerative prion disease of cervids. The expanding geographical range and rising prevalence of CWD are increasing the risk of pathogen transfer and spillover of CWD to non-cervid sympatric species. As beavers have close contact with environmental and food sources of CWD infectivity, we hypothesized that they may be susceptible to CWD prions. We evaluated the susceptibility of beavers to prion diseases by challenging transgenic mice expressing beaver prion protein (tgBeaver) with five strains of CWD, four isolates of rodent-adapted prions and one strain of Creutzfeldt–Jakob disease. All CWD strains transmitted to the tgBeaver mice, with attack rates highest from moose CWD and the 116AG and H95+ strains of deer CWD. Mouse-, rat-, and especially hamster-adapted prions were also transmitted with complete attack rates and short incubation periods. We conclude that the beaver prion protein is an excellent substrate for sustaining prion replication and that beavers are at risk for CWD pathogen transfer and spillover.

Biology↗